KEGG T06677: HVMH

Hydrogenovibrio marinus: HVMH_0547

Entry

HVMH_0547         CDS       T06677

Name

(GenBank) hypothetical protein

K06177

tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]

Organism

hmar Hydrogenovibrio marinus

Brite

KEGG Orthology (KO) [BR:hmar00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hmar03009]
    HVMH_0547
   03016 Transfer RNA biogenesis [BR:hmar03016]
    HVMH_0547
Enzymes [BR:hmar01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     HVMH_0547
    5.4.99.29  23S rRNA pseudouridine746 synthase
     HVMH_0547
Ribosome biogenesis [BR:hmar03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    HVMH_0547
Transfer RNA biogenesis [BR:hmar03016]
Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    HVMH_0547

SSDB

Motif

Pfam:

PseudoU_synth_2

Other DBs

NCBI-ProteinID:

BBN58953

Position

complement(594457..595377)

AA seq 306 aa
MDTTNRQQNSISNSLSNKAHFELQFEVEHASTLIDVLAQQTGLSKQHLKGALAKGCVWFK
AKGKIQKVTRVRRVKKEVTPGDEIFIYYDEAVLNASIPEPRLIDDCHDFSVWYKPKGLLS
QGSKWGDHSTIARWVEMHHLFNGKQRQALVVHRLDRATDGLILLAHTHQAAKLLTEAFMG
RKTTKIYQVGVWGEFPETEQTYDQPIEDRAAISHAKRLDYNAERNISLLEVHIETGRKHQ
IRRHLSGAGFPIVGDRLYGDAKRNATLQALDMMLTAVFLHLGFEDKPYEFSLPTNLNQTL
NDFHTL

NT seq 921 nt +upstreamnt +downstreamnt
atggacacaactaaccgacaacaaaattcgatttcaaacagtctttcgaataaggcgcat
tttgaacttcagtttgaagttgaacacgcctcgactttaatcgatgttttggctcagcaa
accgggctttccaagcagcacttgaaaggcgcgctcgccaaaggctgtgtttggttcaaa
gcaaagggcaaaatccaaaaagtcacgcgggtgcgtcgtgttaaaaaagaggtcactcct
ggcgatgaaatcttcatctactatgacgaagccgtactcaatgccagcataccggaaccg
aggttaattgatgactgtcatgacttcagtgtgtggtacaaaccgaaaggcttattgtct
cagggctctaaatggggagatcacagcactattgcccgctgggtggaaatgcaccacctt
ttcaatggcaaacagcgtcaagctttggtggtacatcgcttggatcgcgcaaccgatggt
ttgatcttactggcacatacccatcaggcagcgaaacttctaactgaagctttcatgggc
agaaaaactactaaaatctaccaggttggggtatggggagagttccctgaaaccgaacaa
acctatgaccagcccattgaagacagagcggccatcagtcacgccaaacgtttggattac
aacgcggagaggaatatctcgctattggaagtgcatatcgaaaccggcagaaaacaccaa
atccgccgccatttgtcgggtgccggtttcccaattgttggagaccgactgtatggcgat
gctaagcgcaacgctaccctccaggctttggatatgatgctgacagcggttttcctgcat
ctcgggtttgaggacaaaccctatgagttcagtttaccaaccaaccttaaccaaacacta
aacgattttcacacgctttaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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