KEGG   Halomonas meridiana: CTT34_02870
Entry
CTT34_02870       CDS       T06424                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
hmd  Halomonas meridiana
Pathway
hmd03030  DNA replication
hmd03430  Mismatch repair
hmd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hmd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CTT34_02870
   03430 Mismatch repair
    CTT34_02870
   03440 Homologous recombination
    CTT34_02870
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hmd03032]
    CTT34_02870
   03400 DNA repair and recombination proteins [BR:hmd03400]
    CTT34_02870
Enzymes [BR:hmd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CTT34_02870
DNA replication proteins [BR:hmd03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CTT34_02870
DNA repair and recombination proteins [BR:hmd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CTT34_02870
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon DNA_pol_IIIA_C HROB tRNA_anti_2
Other DBs
NCBI-ProteinID: QHD48699
UniProt: A0A857GHG5
Position
565341..568844
AA seq 1167 aa
MTVPFVHLRLHSEYSLVDGLVKLKSLVSTTAERGMPALALTDEANLFGLVKFYKAAQGAG
LKPIIGSDLWLSNPHDDAHPYRITLLAMNDVGYRNLTELISKGWTDGQRQGRAILDKQWV
LAQSEGLIALSGGREGEIGRHLLSEHEREARQLLEEWQQAFPDRFYLELIRTGRPLEEAC
VHASVQLAIDTGTPVVATNDVRFLEREDFWAHETRVAIGEGKALDDPRRERRYTEEQYLK
SPEEMAALFADIPEALENSVMIAERCSVDVRLGEIFLPEFGIPEGMTQDEFFRKVSHDGL
TERLDFLFPAEQYPRDSDAFREIDQRYRDRLEFELNVIIQMGFPGYFLIVMDFIQWAKDN
NVPVGPGRGSGAGSLVAYAQKITDLDPIGYDLLFERFLNPERVSMPDFDVDFCMEKRDKV
IEYVADRYGRNAVSQIVTFGTMAAKAVVRDVARAQGKPYSLGDKLSKLIPFEVGMTLAKA
IEQEPALKEFIENDEEAEEIWEMALKLEGTTRGTGKHAGGVVIAPTKLTDFSPLLCDEDG
SGLVVQFDKNDIEDAGLVKFDFLGLRTLTIIDWALEMVDKVRDAAGQGPLNIDAIPLDDG
KTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINR
KHGRAEVSYPHPDYQHDLLKPVLTPTYGIILYQEQVMQIAQVMAGYTLGQADMLRRAMGK
KKPEEMAKQRAGFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWL
KAHYPGPFMAAVMSTEMDNLDKVVPLIEECRHLKLTVTPPDVNVGGYKFTVDTDGRVVYG
LGAIRGVGEGPIGAIVEARQADGPFNDLFDFCRRIDPKRMNKRTLEALIRSGALDNLGPN
RAVLFAAMEDALKAAAQNHANQNLGMMDMFGDAFAAEEETSDVYAEYRHVREWTDRERLS
GEKDTLGLYLTGHPIDEYERELKRFVSTRISDLKPSREPQRVAGLVVAMRTMKSKRGDTM
AFITLDDRTGRIEASLFGELFEQLRGQIESDQVIIVEGEVSSDDFSGGLRLRGKDVTPMV
TARVRYGQAVELALDAGQINGRLVDSLRDSLTPFRDDTGLPVRLQYRHPDAVAWLELAEE
WKVAPSDDLLLALRDVQGQVGVQLRYR
NT seq 3504 nt   +upstreamnt  +downstreamnt
atgacggttccgttcgttcatcttcgtttgcacagtgaatactctctggtcgatggcttg
gtcaaactcaagtcactggtcagcacgaccgctgagcgcgggatgccggcgctggcgctc
accgacgaagccaacctgtttggtttggtcaaattctacaaagccgctcagggcgccggg
ttgaagccgatcattggcagcgatctctggctctcaaatccccacgacgatgcccacccg
taccgcatcacgctgctagcgatgaacgatgtgggctatcgaaacctgaccgagctgatc
tccaagggctggaccgatggccagcgccaggggcgggcaatcctcgataaacagtgggtg
ctggcgcaaagcgaggggttgattgccctgtcgggcgggcgcgaaggcgagattggccgc
catctgctctccgagcacgagcgggaagcgcgccaactgctggaagagtggcagcaggcg
tttcccgaccgcttctacctggaactcatccgcaccggccgacctctggaagaggcgtgc
gtacacgccagcgttcaactggcgatcgacaccggcacgcccgtcgtcgccaccaacgac
gtgcgctttctagagcgtgaagacttctgggcccacgaaacccgcgttgccattggtgag
gggaaggcgctggacgacccgcgccgcgagcgccgctacaccgaagagcagtacctcaaa
agcccggaagagatggcagcgctgtttgccgatattcccgaagcgctggaaaacagcgtg
atgattgccgagcggtgcagcgtcgatgtgcgcttgggagagatctttctgcccgagttc
ggcattcctgaaggcatgacccaggatgagttctttcgcaaggtctcccacgatggtttg
acggagcggctcgatttcctgttccccgccgagcagtacccgagagacagtgacgcgttt
cgcgagatcgaccagcgctaccgtgaccgactggagttcgagctcaacgttatcattcag
atggggttccctggctacttcctgatcgtgatggactttatccagtgggccaaggacaac
aacgtgccggtaggcccggggcgcggctccggtgcggggtctctggtggcctatgcgcaa
aaaatcaccgacctggaccccatcggctacgatctgctgttcgagcgctttcttaaccct
gaacgtgtctccatgcccgacttcgacgtcgatttctgcatggagaagcgcgacaaggtc
atcgagtacgtggctgaccgctatggccggaacgcggtttcccagatcgtcaccttcggc
accatggccgccaaagccgtggtgcgcgacgtggcccgcgcccagggcaagccctactca
ctgggggataagctctccaagctgattccttttgaagtgggcatgacgctggccaaagcc
atcgagcaagagccagccctcaaggagttcatcgagaacgacgaagaggccgaagagatc
tgggaaatggccctgaagctcgagggcaccacgcgcggtaccggcaagcacgcgggcggc
gtggtgatcgcccccaccaaactcaccgacttttcgccgctgctgtgtgacgaagatggc
tcggggctggtggtgcagttcgacaagaacgacatcgaagacgccgggctggtgaagttc
gacttcctgggcttgcgcacgctgaccatcatcgactgggcgctggagatggtggacaaa
gtgcgcgacgctgctggccaaggcccgctcaatatcgacgccatccccctggacgacggc
aaaaccttcgagatgctcaagcgggcggagaccaccgcggtcttccagctcgaatcccgc
gggatgaaggagctgatcaagcgcctgctgccggactcgctggacgatatgatcgccttg
gtggccctattccgccccggtccgctgcagtcgggcatggtggatgacttcatcaaccgg
aaacatggccgggcggaagtctcttatccacacccggattatcagcacgatctgttgaaa
ccggtgctgacgcccacctacgggatcattctctaccaagagcaggtcatgcagatcgct
caggtgatggcagggtacacccttggccaagccgacatgctgcgccgtgccatgggtaag
aaaaagcccgaagagatggccaagcagcgggcaggcttcatggaaggctgcgcggccaac
ggcatcgataaggacctggcgggcaacatcttcgacctggtagagaagttcgccggttac
ggcttcaacaaatcacactcggcagcctacgcgctggtgtcgtatcagaccgcatggctg
aaggcgcactacccaggccccttcatggcggcggtgatgtccacggagatggataacctg
gacaaagtggtgccgctgatcgaagagtgccgccacttgaagctcacggtgacaccgccg
gatgtcaacgtaggtggctacaagtttaccgtggataccgacggccgggtggtgtacggc
ttgggggcgatccgtggcgtcggtgaagggccgattggtgccatcgtcgaagcgcgtcag
gccgacgggccgttcaacgatctgttcgacttctgccgtcgtatcgatccgaaacggatg
aacaagcgcaccctggaagcgctgatacgctctggcgcgttggataatctggggcccaat
cgggcggtgctgttcgcggcgatggaagatgcgctgaaagccgctgcacaaaatcatgct
aaccagaacctgggcatgatggacatgtttggcgatgcctttgctgccgaggaagagacc
agcgatgtctacgccgagtatcgtcatgtgcgcgaatggaccgaccgtgagcggctctct
ggtgaaaaggacaccctggggctctacctgaccgggcaccccattgatgagtatgagcgc
gagctcaagcgctttgtctccacgcgtatcagcgatttaaagccttctcgggagccgcag
cgggtggcagggttagtggtggccatgcggacgatgaagtccaaacgtggcgacaccatg
gcattcatcaccctggacgaccgcaccggacgtatcgaagcgtcgctgttcggcgaactt
ttcgagcagctacgcggccaaatcgaatcggatcaagtgatcatcgtggagggcgaagtt
tccagcgacgacttctcgggcggcctacgcctgcgcggtaaagatgtgacgccgatggtc
acggcccgcgtgcgctacggccaagccgtcgagctagcgctggatgccggacagatcaat
ggccgcttggtcgacagcctgcgggatagtttgacgccctttcgggatgacactggactg
cccgtgcggctgcagtaccgccatccggacgcggtcgcttggctggagctggccgaggag
tggaaggttgcgccgagcgatgatctgctgcttgcgctgcgtgatgtgcaagggcaggta
ggcgtccagctacgctaccgttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (20)   

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