KEGG   Haloferax mediterranei: HFX_1051
Entry
HFX_1051          CDS       T02129                                 
Symbol
tfb4
Name
(GenBank) transcription initiation factor TFB
  KO
K03124  transcription initiation factor TFIIB
Organism
hme  Haloferax mediterranei
Pathway
hme03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hme00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    HFX_1051 (tfb4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hme03021]
    HFX_1051 (tfb4)
Transcription machinery [BR:hme03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     HFX_1051 (tfb4)
 Prokaryotic type
  Archaeal type
    TFB
     HFX_1051 (tfb4)
SSDB
Motif
Pfam: TFIIB TF_Zn_Ribbon zf-RRN7 LysW-like_globular Ribosomal_S27e Cyclin_N YpzI A2L_zn_ribbon DZR Trm112p Sigma70_r4 Elf1
Other DBs
NCBI-ProteinID: AFK18767
UniProt: I3R3F7
Position
complement(1004503..1005501)
AA seq 332 aa
MTESVRRFTTDSARVRNEKKKDSKQTETDREQALSCPECGSETLVSDSEHGETVCDECGL
VVQENEIDRGPEWRAFNSSEKDQKSRVGAPTTNMMHDKGLSTNIGWQNKDAYGRSLSSRQ
REKMQRLRTWNERFRTRDSKERNLKQALGEIDRMASALGLPESVRETASVIYRRALNDDL
LPGRSIEGVATAALYASARMASTPRSLDEITSVSRVEKEEIARTYRYVVRELKLEIKPAD
PEQYVPRFASELGLSDESERRARQLLKNAKEQGVHSGKSPVGLAAAAVYAASLLTNEKVT
QNEVSGVANISEVTIRNRYHELLEAEEQAQMP
NT seq 999 nt   +upstreamnt  +downstreamnt
atgacagaaagtgtccgacgtttcacgacagatagcgcgcgcgtgcgcaatgaaaaaaag
aaagattccaagcagacagagaccgaccgagagcaggcgctctcgtgtcccgaatgtggc
tcggagacgcttgtctccgactcggaacacggagagaccgtctgtgacgagtgtggtctc
gtcgtccaagaaaacgagatagaccgcggcccggagtggcgtgcgttcaactcctcggag
aaagaccagaagtcccgtgtcggtgccccgaccaccaacatgatgcacgacaaggggctt
tcgaccaacatcggctggcagaacaaagacgcctacggccgctcgctctcgtctcgacaa
cgcgaaaagatgcagcgactccgcacctggaacgagcgcttccgcacccgcgactccaag
gagcggaatctcaagcaggcgctcggcgaaatcgaccggatggcctccgcactcggcctt
ccggagagcgtccgcgagactgcgtccgttatctaccgccgcgctctcaacgatgactta
ctccccggccgttctatcgaaggcgtcgcaacagcagcgttgtacgcctccgcccgcatg
gcaagtacgcctcggtcgctcgacgagattacgagtgtttcgcgcgtcgaaaaggaagaa
atcgctcgcacgtaccggtacgtcgtccgcgagctaaagctcgaaatcaagcccgcagac
cccgaacagtacgtcccacgattcgccagcgaactcggactgtccgacgaatccgagcgc
cgcgcacgccaactcttgaaaaacgccaaagaacagggtgtccattcagggaagtccccg
gtcggcctcgccgccgccgcagtctatgcggcctcgcttctcaccaacgagaaggtaaca
caaaacgaggtatccggcgtcgctaacatctccgaagtaactattcgcaaccgctaccac
gaactgctcgaagccgaagagcaggcccagatgccctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (20)   

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