KEGG   Hydra vulgaris (swiftwater hydra): 100199001
Entry
100199001         CDS       T01080                                 
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
  KO
K10590  E3 ubiquitin-protein ligase TRIP12 [EC:2.3.2.26]
Organism
hmg  Hydra vulgaris (swiftwater hydra)
Pathway
hmg04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:hmg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    100199001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hmg04121]
    100199001
Enzymes [BR:hmg01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.26  HECT-type E3 ubiquitin transferase
     100199001
Ubiquitin system [BR:hmg04121]
 Ubiquitin ligases (E3)
  HECT type E3
   100199001
SSDB
Motif
Pfam: HECT WWE Maestro_HEAT
Other DBs
NCBI-GeneID: 100199001
NCBI-ProteinID: XP_047130159
Position
4:16107767..16167175
AA seq 1920 aa
MADDVQSDQSGSQKILGKTRASRRNIIPEQGPSNQDSLQTQKFGTEDLRVKSKRKSRVSQ
SDTQLTCSDKSDIGGRKKKFNKQRKKLKESQSSSDILSESLSTNQESCKSEYNLTTSENF
SEPIKSLINLTTELGVALDSEAKENKLSKSKSAVILPAPFSEETQKITKSFSDQTSRKRK
QKLAPLFSPKKLRSSVKQRISKTGGWSSRNRSPPGRRTASVNLGSCASTRRNRRSRVANS
QPTVMENSRDLETTVGNTSSNEGTDDVVNAPLLGAMASLASVEGFSGGRDAGSNLGLEEA
DISRLQALLEARGLPAHLFGSLGPRMHLLLHKTFNSGASTKAQQLMTSMQSGDETLQLQG
VMEMCQMLVMGNEETLGGFPAKQVVPILITLLQMEHSFDIMNHACRALTYLMEALPRSSI
VVVDAIPSLLAKLQSIQCMDVAEQALTALEMLSKRHGKNILHAGGLNASLLFLDFFSIVA
QRSALAIAANCCQSVTVDEFSYIVDSIEIISNQLLNQDKRSIESVCLAFTRIVDNIQSDK
ALLLKLSEHGLLANIKKLLTNPPIISSSTFVMVIRMLAIMCANCPSLAVELLKLDISETV
QYLLIGSNDVTLVDSVELVARSPQELYELTCLISELMPSLPTSGIFSIDTQLSKGLQQST
QSGVWQWKDDLNVWHSYLWVDNRIIEAAYQSGEDEISLSTLGRNYIIDFPNMQQINEDTG
TMRLIQRKSDQGHATVNKSKISEEDERVYIFKNEPEKGKNLVQSLIRIVYVVYYSSVGPA
VKHKCLCSALKMLYHSPSELLRDVLQNIPISSYIAGMLSSSDLRIVTSAMQKIEILMTKL
SDIFHVYFRREGVMHKIKILADSDINNDWKCLAGSSEKDSDIILRKNQNNIELPCTMHGV
LAPPETSDIVPKPSKFSDALRSKKRGGSKLTRRQSSGKYGEDLPQSSSKKLSHETIRPKS
ASFSSSNNLASTNANSTKRSFFSNFAPRWGRSESYHNTDASNVTNVAENSFKEQFNKEHD
KNRECIKQWIKKTATEFYSKYFAGSLGSTHPALSVLQRLTQASEELAALRSDNIHPLLEL
CSVLINDNQQAGASPFEIVHSGTVTNLLRYLTNKDDKSSKRSARIKTFLTAFLDIKKNEM
KTNDTTKNLINSVHICEKPALIPLVQKLNLCVNQLEQFPVKCHDSGGGNGTRGGTSALRF
FNTHQIKCSLSRHPDCTSVKQWTGGAVKIDPLALVQAIERYLIVRGFGRVKDEFSNDVSD
NDDDDQSEDEIEESWASQLQGSLNGKHMLEFSMNGHILPYNMTIYQAVRQYGTTQTEDIS
DTEDYSPFGRASIWSGTHVLHFRPINQTEPVLSPKRIKSDSAHKASTSVSLENGDLDPAD
HFLCEKLPFEKFNEDPSLEVICLLRVLYYLNSNWGDYFGLQACSSVVPKTEFVNTKLTAK
ATRQLQDPLIIMTGNLPSWLSELAEACPFIFPFECRQMLFYVTTFDRDRAVMKLQETVPD
ITTNDSSDRVAPRLDKKKRTVNRNNIFKEGESLINDFTNSKSLLEIQYEGEVGTGLGPTL
EFYALVSKYFQRSDNDMWRGDKVSVVESDGDSKGQVEYCSTLHGLFPIALPKSIKNSQLN
KIKAKFRYLGKFIAKACMDSRMIDIPLSRTFYKWLLKQDNTIDITDLKYVDSILYQSISQ
LYDVCLEKKRLENDTSYSKESLSLALNSLTLDGVSIEDLGLDFILPGTNIELKKNGKDTL
VTVENLEEYLNLIVKYSLRDGVARQLNAFKEGFEQFFPLKNLRMFYPEEMELLLCGCKSE
QWVAKDLFECCRPDHGYTSSSRAVCYLFDILSKYNTEEQRLFLQFITGSPKLPVGGFKSL
NPPLTIVRKTVDNNANPDDYLPSVMTCVNYLKLPDYSSLEIMYDKLKSAYNEGKNAFHLS
NT seq 5763 nt   +upstreamnt  +downstreamnt
atggctgatgatgtacaatctgaccagagtgggtcacaaaagattttaggaaaaactcgt
gcttcaagaagaaatattatacctgaacagggaccgtcaaatcaagattcattacaaaca
cagaaatttggaacggaagatttaagggtaaagagcaaaagaaaatcaagagtatcacaa
tcagatacacaacttacctgcagtgataaatctgatattggaggtagaaagaaaaaattt
aacaaacaaagaaaaaagttaaaagaatctcaatcatcttcagatatattgagtgaatct
ctatcaacaaaccaggagagctgtaaatctgagtataatctgacaacttctgaaaatttt
tcagagcctattaagtcacttattaatttaactactgagcttggtgttgcattagattct
gaagcgaaagaaaataaattatctaaaagcaaaagtgcagttatattacctgctccattt
tcagaggaaactcaaaaaataaccaaaagtttctctgatcagacatctcgtaagcgtaaa
caaaaattagcacctctattttcacccaaaaagttacgtagttctgtaaagcaaagaatt
tccaagacgggtggctggtcttctcgaaacaggagtcctcctggtcggaggacagctagt
gtaaacctggggtcttgtgctagtactaggagaaatagaagatctcgagtagccaattct
cagccaacagtaatggagaattccagagatttagaaaccacagttggaaacacatcatct
aatgaaggcactgatgatgttgtcaatgcacctcttcttggagcaatggcttcgttagct
tcagttgaagggttttcaggaggaagagatgccggttctaaccttgggcttgaagaagca
gatatatctagattacaagctttactggaagcaagaggattgccagcacatctttttggc
agtcttggtcccagaatgcaccttcttctccataaaacatttaatagtggcgcaagtaca
aaagctcaacaattaatgacttcaatgcaaagtggtgacgagactctccaactgcaaggt
gtcatggaaatgtgccagatgttagtgatgggaaatgaagaaacattaggaggatttcca
gccaaacaagttgtaccaatattgatcacacttctgcaaatggagcatagctttgatata
atgaatcatgcatgccgtgcattaacctatttaatggaagctcttccacgatcctctatt
gtagtagtagatgcaataccttcccttttagcaaaattgcagtctattcagtgtatggat
gttgcagaacaagcgcttactgcactagaaatgctatctaaaagacatgggaaaaatatt
cttcatgctggtggtttaaatgcaagtttattatttttggatttcttctctattgttgct
caaagatcagctcttgccattgcggctaactgctgccaatcagttactgttgatgagttt
agttacattgttgattcaatcgaaataatttccaatcagctgttaaatcaggataaaaga
tctattgaaagtgtttgtttagcatttactagaatagttgacaacatccagtctgataag
gctttactgttaaagctttctgaacatgggctacttgctaatattaaaaaactgcttaca
aatccacctattataagcagtagtactttcgtgatggtcattcgtatgttagccattatg
tgtgcaaattgtccctctcttgctgtagaattactgaagcttgatatttcagaaactgtg
caatatttattgattggtagcaatgatgttactttggttgatagtgtagaattagttgct
cgtagtccacaagaactctatgaattaacttgcttaataagtgaacttatgcctagctta
cctacatctgggatattttctattgatacacagttaagcaaagggttacaacaaagtact
cagtcaggtgtttggcaatggaaagatgatctcaatgtgtggcattcctatttatgggta
gataaccgaataatagaagcagcatatcaaagtggagaggatgaaataagtttgtcaaca
cttggacgaaattatataattgactttccaaatatgcagcaaataaatgaagacacggga
acaatgcgcttaattcaaaggaaatcagatcaggggcatgctactgtgaacaaatctaaa
atatctgaagaagatgagcgagtttatatttttaaaaatgaaccagaaaaaggaaaaaat
cttgttcagtctttaattaggatagtctacgttgtatattattcttcagttggtcctgct
gtaaagcataaatgtttgtgttcagctttaaagatgttgtatcattctcctagtgaactt
ttacgagatgttcttcaaaatattcctatatccagttatatagcaggaatgctctcttct
agtgacttaagaatagttacttcagcaatgcaaaaaattgaaattttaatgacaaaactt
tctgatatatttcatgtttattttcgtcgtgaaggtgttatgcataagataaaaatctta
gctgattcagatataaataatgactggaaatgtttggcaggctccagtgaaaaggatagt
gatataattttaagaaaaaaccaaaacaacattgagcttccttgtacaatgcatggtgtt
ttagcgcctcctgaaacttcagatattgtaccaaaaccatcaaagttctctgatgcctta
agaagtaaaaaaagaggaggttcaaagttgactcgcagacaaagtagtggaaagtatgga
gaagacctgcctcaatcttcttccaaaaagctatctcatgaaaccattagacctaagtca
gcatctttttcttcatccaataatttggcatcaaccaacgcaaactcaaccaaacgatct
tttttttctaactttgcacctagatggggtcgttcagaatcgtatcacaatacagatgct
tctaatgtaactaatgttgcagaaaattcatttaaggagcaatttaacaaagaacatgac
aaaaacagagagtgcataaaacaatggataaaaaaaacagctactgaattttacagcaaa
tactttgcaggaagtttgggttcaactcatcctgctctaagtgttttacaaagattaaca
caagcatctgaagaacttgcagcattaagaagcgacaatatccatccattattagaactg
tgcagtgtgttaataaatgataaccaacaggcaggtgcatcaccttttgaaattgtacac
agtggcacagttactaatttattaagatatttaactaacaaggatgacaaatcttcaaaa
agaagtgctcgaattaaaacatttctcactgcttttcttgatataaagaaaaatgagatg
aaaacaaatgatacaacaaagaatttaattaattctgtgcatatctgtgaaaaaccagca
ttaataccattagtccagaaactcaatctttgtgttaaccaattagaacagtttcctgtg
aaatgtcatgattctggtggtggtaatggaacaagaggtggaacatcagctcttcggttt
tttaacactcatcaaataaagtgctctctcagtcgacacccagactgtacatcagtaaaa
caatggacaggaggagctgtcaaaattgatccattagcacttgtgcaggcaatagaaaga
tatttaatagtcagaggatttggtagagtaaaagatgagttttcaaatgatgttagtgac
aatgatgatgatgatcaatctgaagatgaaatcgaagaatcctgggcttcccaattgcaa
ggctctctcaatggaaaacacatgttagagttttctatgaatggacacattttgccatat
aatatgacaatatatcaagctgttagacaatatggaactacacagacagaagatataagt
gatacagaggattacagcccatttggtagagctagtatatggtctggaacacatgtttta
catttcagacctattaatcaaacggagcctgttttatctccaaaaagaatcaaatcagat
tcagcacataaagcaagcacctcagtttcactagaaaatggagatttagatccagctgat
cattttctttgtgaaaaactaccttttgaaaaatttaatgaagatccctcacttgaagta
atatgtttgctacgtgttctatactatcttaatagcaattggggagattattttggtctt
caagcctgtagttctgtagtacctaaaactgagtttgttaatactaaactaacagcaaaa
gcaacacgacaacttcaagaccctctcattattatgactggtaatttaccatcatggctt
tcagaattggcagaagcatgcccttttatatttccttttgaatgtcgtcaaatgcttttc
tatgtcacaacatttgaccgagatcgagctgttatgaaattgcaagaaactgttcctgat
attactactaatgacagcagcgatcgagtagctccaagactagataaaaaaaaacgcact
gttaaccgtaataacattttcaaagaaggtgaatcattaattaatgatttcacaaattca
aaatctctattagaaatacaatatgaaggcgaggttgggactggtcttggacctacatta
gaattttatgctttagtttcaaaatattttcaacgaagtgataatgatatgtggagagga
gacaaagtatcagttgttgagagtgatggtgattcaaaaggacaggttgaatactgtagt
actctccatgggttgtttccaattgcactacctaaaagtataaagaattcacaattaaac
aagattaaagcgaaatttcgttatctcggaaagtttattgcaaaagcatgtatggactct
cgtatgattgacattcccttaagtaggacgttttataaatggttgcttaaacaagataat
acaatagatataacagacttgaaatatgttgactctatcttatatcaatcaataagtcaa
ttatatgatgtttgtcttgaaaagaaacgccttgaaaatgatacttcttattctaaagaa
tctttaagtttagccttgaacagtttaactttagatggtgtttctattgaagatttaggt
cttgattttatattacctggtactaatattgaattaaaaaaaaatggtaaagatacatta
gtaacagttgaaaacctagaagaatatttaaatttgattgtaaaatacagcttacgcgat
ggagtagcaagacagttaaatgcttttaaagaaggttttgaacaattttttccgttgaaa
aatctccgaatgttttatccagaagaaatggaactgcttttatgtggctgcaaaagtgaa
caatgggttgcaaaagatttatttgaatgttgccgacctgaccatggttatacttcaagc
agccgagcggtttgttacttgtttgacatattaagcaaatacaatactgaagagcaaagg
ttgttcttacagtttattaccggaagtccaaaactacccgttggtgggttcaaaagttta
aacccgcctcttacaatcgtccggaagactgttgacaacaacgcaaaccctgatgattat
ttgccctctgtaatgacttgtgttaattacctaaagttgcccgattattcaagcctagaa
attatgtatgataagcttaaaagtgcatataacgaagggaagaacgcctttcatttatct
tag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (119)   
   KEGG ORTHOLOGY (1)   
   RefGene (115)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (134)   

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