KEGG   Hydra vulgaris (swiftwater hydra): 100199190
Entry
100199190         CDS       T01080                                 
Name
(RefSeq) cullin-4A
  KO
K10609  cullin 4
Organism
hmg  Hydra vulgaris (swiftwater hydra)
Pathway
hmg03420  Nucleotide excision repair
hmg04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:hmg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    100199190
  09124 Replication and repair
   03420 Nucleotide excision repair
    100199190
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hmg04121]
    100199190
   03400 DNA repair and recombination proteins [BR:hmg03400]
    100199190
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hmg04147]
    100199190
Ubiquitin system [BR:hmg04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Cullin
     100199190
DNA repair and recombination proteins [BR:hmg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      100199190
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      100199190
Exosome [BR:hmg04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   100199190
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW KCNQ_channel DUF295
Other DBs
NCBI-GeneID: 100199190
NCBI-ProteinID: XP_047130180
Position
4:complement(16553681..16602947)
AA seq 772 aa
MENDSLYGKNGFNKENHITENGFIKENLFAENKHCNKSNTSLNEGFMSTPNHAKKLVIKN
FKVIPSLPDNYKDVTFEKLKDAVSAIHLEHSISYSLEELYKAVENLCSHNMSSQLYERLR
EVCEEHVKTIIAEFSSDIIDNFVFLKKMDKQWESHCRQMTMIRSIFLYLDRVYVLQNSSV
LSIWDVGLQLWRIHIMGHPFIQSKTVQALLFFIKNERNSETVDRSLLKRLIKMLADLQMY
QQIFEPVFLKETDQLYLVEGNTLMSKVDVPNYLQHVERRLKEESERLFHYLEPCTRKALI
SSVENQMISCHLTNILNKGFNYLMDCSANVHLLLMYNLFSRVKNGLDSLCEYFGAYIKVK
GLTIINDTERDKYMVQELLEFKEKLDMLIEESFNKNEKFIITMKDSFEYFINKRPNKPAE
LIAKFVDIKLRAGNKEATEDELERRLDKIMILFRFIHGKDVFEAFYKKDLAKRLLLGKSA
SVDAEKSMLSKLKQECGGAFTGKLEGMFKDMELSKDIMSSYKQMVQLQNTSSGIDLNVNI
LTMGYWPTYTPIDVLLPNEMVKLQEVFHKFYLSKHSGKKLQWQTNLGSCTVLACFPSGNH
ELHVSLFQLLCLLQFNEGDEFLFEDLLTATGIEEGELKRTIQSLACGKIRVLRKLPQGKE
VNRGDKLIFNKKFSHNLYKIKINQVQMRETQEENQLTNEQVFQDRQYQIDAAIVRILKTR
KSLIHNLLVTELYSQLKFSVTPSDIKKRIESLIDRDYMERDKDNSNTYHYIA
NT seq 2319 nt   +upstreamnt  +downstreamnt
atggaaaatgatagtttatatggaaaaaatggctttaacaaagaaaatcatattacagaa
aatggcttcatcaaggaaaatctttttgcagaaaataaacattgtaacaaaagtaacact
tctctcaatgagggttttatgtcaaccccaaatcatgctaagaaattagtcattaaaaat
ttcaaagtaatacccagtctccctgataactacaaagatgtaacttttgagaaattaaaa
gatgctgttagtgctattcatctagaacattctatttcatatagtcttgaagaactttac
aaagcggtagaaaatttgtgttcacataatatgtcgtctcagttgtatgaaagactcaga
gaagtttgtgaagagcatgttaaaactatcattgcagagttttcttctgatatcattgat
aattttgtttttttaaaaaaaatggataaacaatgggagtcacactgtcggcagatgacc
atgatcagaagcatttttttgtatcttgatagagtatatgtactgcaaaactcatcagtt
ctttcaatatgggatgttgggcttcaactatggagaatacacattatgggtcatcctttt
attcaatcaaagacagtacaagcattactattttttatcaaaaatgagcgcaatagtgaa
acagttgacagaagtttactgaagagattaataaaaatgctagctgatcttcagatgtac
caacaaatatttgaaccagtttttttaaaagaaactgatcaattgtatttggttgaagga
aatacattaatgtcaaaagtagatgtcccaaactatttacaacatgtggaaaggcgacta
aaagaagaatcagagcgactttttcattatttagaaccatgtactagaaaagctttgatc
agttctgttgaaaatcaaatgattagttgtcatcttacaaatatactcaacaaagggttt
aactacttaatggattgcagtgcaaatgttcatcttttgcttatgtacaatttattttca
agggtaaaaaacgggctcgatagtttgtgcgaatattttggtgcttacataaaggtaaaa
ggtcttacaataattaatgatacagaaagagataaatacatggtacaagaattgcttgaa
tttaaagagaagttagacatgcttattgaagagtcatttaacaaaaatgaaaagtttatc
attactatgaaagactcttttgaatattttattaacaaacgaccaaacaaacctgcagaa
cttatagcaaaatttgtggatataaaactcagagctggaaataaggaggcaacagaagat
gaacttgaaagaagattagacaaaatcatgatcctttttagatttatacatggaaaagat
gtttttgaagcattttacaaaaaagatttagcaaaaagactattacttggtaaaagtgcc
tcagttgatgccgaaaagtcaatgttgtctaagttaaagcaagagtgtggcggtgcattc
actggcaaactggaggggatgtttaaagatatggaactttcaaaagacatcatgagtagt
tacaaacaaatggttcagcttcagaacacttcttctggcattgatctaaatgtaaacata
ttaacaatgggatattggcctacttacacacctatcgatgttcttctgcctaatgaaatg
gtgaaacttcaggaggtttttcataagttttatttgagtaaacacagtggaaagaagtta
cagtggcaaacaaatcttggaagttgtacagttttagcttgttttccatcaggaaatcat
gagctgcacgtatcgttgtttcaacttttgtgtttgcttcaatttaatgaaggtgatgaa
tttttatttgaagatcttcttacagctacaggaattgaagagggagagttaaaaaggacg
atacaatctttagcatgtggcaaaatcagagtcttgcggaaattacctcaaggaaaagaa
gtaaacagaggggacaaactaatattcaacaagaagttttctcataatttgtataaaata
aagattaatcaagttcaaatgagagaaacacaagaagaaaatcaattaacaaacgagcaa
gtattccaggatcgccaatatcaaattgatgcagcaattgttcgaatattaaaaacccgg
aaaagtttaattcataacctcctcgtcacagaattatacagtcaacttaagttttccgta
acgccctccgatattaaaaaaagaattgaaagtttgatagacagggattacatggaacga
gataaagataactccaatacttaccattatattgcgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (57)   
   KEGG ORTHOLOGY (1)   
   RefGene (53)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (73)   

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