KEGG   Hydra vulgaris (swiftwater hydra): 100209293
Entry
100209293         CDS       T01080                                 
Name
(RefSeq) twinkle mtDNA helicase
  KO
K17680  twinkle protein [EC:5.6.2.3]
Organism
hmg  Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:hmg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:hmg03029]
    100209293
Enzymes [BR:hmg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     100209293
Mitochondrial biogenesis [BR:hmg03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Mitochondrial DNA maintenance factors
    100209293
SSDB
Motif
Pfam: AAA_25 DnaB_C ATPase AAA_22 T2SSE AAA_29 AAA_23 ABC_tran nSTAND3 Rad17 AAA_16 AAA_18 cobW NACHT AAA_33
Other DBs
NCBI-GeneID: 100209293
NCBI-ProteinID: XP_002164316
UniProt: T2M7E5
Position
3:7016001..7018500
AA seq 704 aa
MESLISCACQAVRRTGIRFVTSQFNNESVPRNNEILSRRNNNATTLQNTLKSEKTVDSKN
IPLNSSSKKYKYFKGFNKTLSLSKFAECTLLKTYNMTVRTQSYIHTAAASQEKWLSVQEI
EEVLKQSGSTFKKGHTGYLTACQECNIEYEIEELNLFVDMHTGNTTCTCCGKEMSWKEFK
NKTPYVNSHENFKISEKQPVYLQSCSPEEHSYWQNSAPITSEVLKDIEKYLKLNHIDENI
LNNFGVRVAYDCNCEKYEMDGIIFPYYDITKTVLMGFKKIFFKNQEQTLIGNREDLNLFG
WQCIASGQKEVVLTANELDCIAVKWATGVPCLALPTSNLPPSLLPFLEQFDRITFWFPNN
YQSRQNVLHFTKKLNMLRCFTTGKNVESPLFCLEYGKDFMKKTLQESWCMTIDRLLTIKD
IGDELFNELTHAKENAGVAFTRFPLLNDFLKGHRRGELTIFTGPTGSGKTTFLSELSLDL
CMQGINTLWGSFEIKNVRLANIMLHQYSGIALEKHMDKFSKWYECFENLPMYFMSYYGAQ
DLHSVIQTIEHSVYMYDIEHVIIDNLQFMTTISNDDDRFQALDKAISLFRKCASELNIHV
TIVVHPRKENDDSILQTASVFGTAKATQEADNVLILQKTDNLIMQVKKNRFNGTVGTIPL
CFNPDSLCLSGFFRNVETGEGVLPELKPIRPIQNLTAARRSKKI
NT seq 2115 nt   +upstreamnt  +downstreamnt
atggagtcactcatatcctgtgcttgtcaagcagttcgaagaacagggattcgttttgta
acttctcagtttaacaacgaaagcgtaccaagaaacaatgaaatattgtcaagaaggaat
aataatgccactacacttcagaacacactcaaaagtgaaaaaacagttgattcaaaaaat
ataccattaaactctagtagtaaaaagtataaatatttcaagggattcaataagacttta
tcattatcaaaatttgcagaatgtactttgttaaaaacttataacatgactgttcgaaca
caaagttatatacacactgctgctgcttctcaagaaaagtggctttctgtacaggaaatt
gaagaggtgttaaaacaatcaggttcaacttttaaaaaaggacataccggatatttaaca
gcatgtcaagaatgcaacattgaatatgaaattgaagaattaaatttatttgttgacatg
catactggcaacacaacatgcacttgttgtggaaaagaaatgtcatggaaggaatttaaa
aacaaaacaccttatgttaatagccatgaaaattttaaaatttctgaaaaacagcctgtt
tatttgcagtcttgttctcctgaagaacacagttattggcaaaattctgctcctataact
tctgaagtgctaaaagacatagagaagtatttaaaattaaaccatatagatgaaaatatt
ttaaataattttggtgttcgtgttgcttatgattgcaattgtgaaaaatatgaaatggat
ggtataatatttccttattatgatatcaccaaaactgtcctgatggggtttaagaaaata
ttttttaaaaatcaagagcaaacacttattggaaatagagaagatttaaatttgtttggt
tggcaatgcattgcttcaggtcaaaaagaagttgttcttacagcaaatgagttagactgt
attgcagtgaaatgggctacaggtgttccatgtttagccttacctacttcaaaccttccc
ccatctctgttaccatttttagagcaatttgatcgtattaccttttggtttcctaacaat
tatcagtctagacaaaatgtacttcattttactaaaaagctgaatatgttgagatgtttt
actacaggcaaaaacgttgagagtcctttattttgtcttgaatatggaaaagattttatg
aaaaagactttacaggaatcttggtgtatgactatagaccgtcttttaactatcaaagat
attggagatgagttgtttaacgagttgacacatgccaaagaaaatgcaggtgttgctttt
actcgatttccacttttaaatgactttttaaaagggcatcgaagaggtgagttgactata
tttactggccccaccgggtctggaaaaacaacttttttatctgagttatctcttgatctt
tgcatgcaaggcattaacacactgtgggggagttttgaaattaagaatgttaggcttgca
aatatcatgcttcatcaatattctggtattgctttagaaaagcatatggataagttttca
aaatggtatgaatgttttgaaaacctgccaatgtactttatgagttattatggcgcacaa
gatcttcatagtgttatacaaaccatagaacacagcgtttatatgtatgacatagaacat
gttattattgacaatttacagtttatgaccacaattagcaatgatgatgatcgttttcaa
gccttagacaaagccattagtttatttcgaaaatgtgcttctgaattaaatattcatgta
actattgttgttcaccctagaaaagagaatgatgattcaattttacagacagcctcagtt
tttggtactgcaaaagcaactcaagaagctgataacgttttaattctccaaaaaacggat
aatctgatcatgcaagtgaaaaaaaaccgtttcaatgggaccgtaggtacaatacctttg
tgttttaatcctgattcattgtgcctgtctgggttttttcgtaatgttgaaactggtgaa
ggagtcttacctgaactaaaaccaattagacctatacaaaatttgactgccgctagaaga
agtaaaaaaatatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (15)   
   Pfam (15)   
All databases (60)   

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