KEGG   Hydra vulgaris (swiftwater hydra): 100214607
Entry
100214607         CDS       T01080                                 
Name
(RefSeq) paired amphipathic helix protein Sin3a-like
  KO
K11644  paired amphipathic helix protein Sin3a
Organism
hmg  Hydra vulgaris (swiftwater hydra)
Pathway
hmg04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:hmg00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    100214607
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hmg03036]
    100214607
Chromosome and associated proteins [BR:hmg03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     100214607
    REST complex
     100214607
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    100214607
SSDB
Motif
Pfam: Sin3a_C PAH Sin3_corepress
Other DBs
NCBI-GeneID: 100214607
NCBI-ProteinID: XP_047133014
Position
5:complement(33286920..33307778)
AA seq 1303 aa
MKRSHEDADIYNVRRPAMPGSHNLTSISASHQNAVIVGSHPASGLSGSHQLSGPHHLPAI
SGPHPPAGSHSTSASFSHQTHPPTPKQLTHNFEQMRDLTRPAFSGSHMPLPNVSNSSPPV
NGSHSSLTQQSAHMPPKPSFQTHVQGPSHVAGGQQQYQRLKVEDALSYLDQVKLQFGNKP
QVYNEFLDIMKEFKSQTIDTPGVISRVSALFKGHIDLIVGFNTFLPPGYKIEVSLTDINT
VNVCAPTGTTTHLISGSGLIAAPSQPNLNKPPVVQSISHVSTLVSTAVTTTLPKSPTRPI
SLPSKSSSPVSSAPVMSLPSPGVHSQTQAQHHAINYVTKIKNRFQGQPEVYQKFLDILNN
YQTEQKAIKENTVDQYGRVCQEQDIYAREGKLATEVYQQVAKLFNKQEDLLQEFSQFLPD
ATGSTFNPNMVSTVAAASVVTQYQPLSKGGKITTSAGNNATKILTVKTKKLGSQNNVKQE
QMEIDKDSSDKNKKRHKSALKDVSLEEAVKHGSFSDFAFFDKVRKALKSQEVYENFLRCL
TLFNNEVISRAELIQLSTTFLGKFPDLFNWFKTFLGYKDNQQPETNITGFKDRGTGGELA
HLEIDFASCKRSGASYRALPKSYTQPKCSGRTQLCKDLLNDTWVSLPSWSEDTQFPGTRK
TQYEEYIYKCEDERFELDIVVEANLSTIKVLEGVQKKLSRMNSDDQLKLRLDNCLGGTSE
IIHRKAIYRIYGDKSPEIIDGLKKTPNVAIPVVLKRLKQKDEEWRIAQKQFNRIWRDQNE
KYYLKSLDHQGINFKQNDLKAIRSKSIIQHIEMLYEERSDQIDEGSTELSGPHITFVYQD
QSTLEDASSLIIHHMKRQTSIHKEDKTKIKAVLLHFCQNLFFAPRGELSDDEQEEVLESK
HISYQNDEYNLFFTNSAWFIMLRMHQMLCERLLKMNQLAAEAAAFELNDKKHRREGTAVA
LHLKKMPTTDIEEYYPGFLVMVKNLLDGHTDSNSFEDSLREAFGVNSYIAFTIDKLIQNI
VRQLHSLVTDDISMKLYALYEDERRNGAAGGSSITATARSGLELAYQKKVETLLSDENSY
KIYFHKDNGTCKASIELLPNEGDLSEDQAEVEKWSEYVERFVGNSEVMSELKEHLCKKPI
FLLRNSRVLQRFSKRQNKHKRKKRDECEDNDEPSESVSSSTSDVIMDNRLECKISQNTYK
MRYVSGTRDLMFRRSTVGKSLKSHPSINMRLHSIYKTSHEAWLHENTTRDQCHQTELWFT
GKDGSEDMMSCITTKDVFKHGGININKYSVIYTKDSKNGFKSA
NT seq 3912 nt   +upstreamnt  +downstreamnt
atgaaacgaagccatgaagatgctgatatttataatgtaagacgaccagctatgcctgga
tctcataatcttaccagtatttcagcttcgcatcaaaatgctgttatagttggatctcat
cctgcttcaggtctttctggttcacaccagttatctggaccacaccatcttcctgccata
tctggacctcatcctcctgctggttcacattctacttcagccagtttttctcatcaaact
catcctccaacccctaaacagttgacacataatttcgagcaaatgagagatttgacaaga
ccagcattttctggttctcatatgcctctacctaatgtttcaaactcttcccctccagta
aacgggtcccattcttcattgactcaacaatctgctcatatgcctcctaagccttctttt
caaacacatgttcaaggtccatctcatgtagctggaggacagcagcagtaccagaggttg
aaggtggaagatgcattatcatatttagatcaagtaaaattacagtttgggaataagcct
caagtctacaatgaatttttggatatcatgaaagagttcaaatcacaaactattgatacg
cctggagtaattagtcgtgtatcagcactttttaaaggacatattgatttgattgttggc
tttaatacttttctgcctcctggttacaagattgaagtaagtttaacagatattaacaca
gtcaatgtgtgtgcaccaactggtactacaactcaccttatatcaggtagtggtctaata
gcagctcctagccagccaaacttgaataagccacctgttgtacagtctataagccacgta
agtaccttagtatctactgctgtaactactacattaccaaaatctccaactcgacctatt
tctttaccttcaaaatcctcttcccctgtttcatctgcacctgttatgtctttaccatcc
cctggtgtccattctcaaacacaggctcagcatcatgctattaattatgtcacaaaaata
aagaatcggtttcaagggcaacctgaagtctaccagaagtttcttgacattctcaataat
tatcaaacagaacagaaagcaattaaggaaaatactgtggatcagtatggtagagtgtgt
caagaacaggatatttatgctagagagggaaaacttgctacagaggtctatcagcaagtt
gctaaactttttaataagcaagaagatttattgcaagaattcagtcagttcttacctgat
gctactggatctacatttaatccaaatatggtatctacagttgcagctgcttctgtggtt
actcaatatcaaccattatctaaaggtggaaagattacgacatctgctggaaataatgca
acaaaaatattaactgtaaaaactaaaaaactaggatctcaaaacaatgtgaaacaagaa
caaatggaaattgataaagatagctcagataaaaataaaaaacgccataaatcagcatta
aaagatgtttcccttgaggaagctgtaaaacatggaagtttcagtgattttgcatttttt
gataaggttcgaaaagcattaaaaagtcaagaggtgtatgaaaactttcttcgatgttta
acactatttaataatgaagtaatttccagggctgaattaattcaattgtctactacattt
ttggggaaatttcctgatttgttcaattggtttaaaacatttcttggatataaggacaat
caacagcctgaaacaaatataacaggatttaaggacagaggaactggtggagaattagct
catttagagattgattttgcttcatgcaagagaagtggcgcaagttaccgtgctttacct
aaaagttacactcagccaaagtgctctggccgaacacaactatgtaaagatcttctcaat
gacacctgggtttcactcccatcttggtcagaagacactcaatttcctggtacacgaaaa
acacagtatgaagaatatatttataaatgtgaagatgaacgttttgaacttgatattgtt
gttgaagccaatctatcaacaatcaaagttttagaaggcgtacaaaaaaaactctcacga
atgaactctgatgatcagctgaaattacgcttagacaattgtttaggaggcacttctgag
atcattcataggaaagctatttatagaatatatggagataaatcaccagaaatcatagat
gggttgaagaaaacacctaatgttgctattcctgtggttttaaagcgactcaagcagaaa
gatgaggaatggagaattgcgcagaaacagtttaatcgtatttggagagatcagaatgaa
aaatattatcttaagtctttagatcatcaaggtataaactttaaacaaaatgatttgaaa
gctattcgatcaaaaagtattattcaacatatcgaaatgttatatgaagagcgaagtgat
caaatagatgaaggaagcactgaattatctggtccacatatcacttttgtttatcaggat
caatcgacacttgaggatgcgtcatcattaataattcatcacatgaagcgtcaaactagt
attcacaaagaagacaaaacaaagattaaagctgtcctgcttcatttttgtcaaaatttg
ttttttgcaccgcgcggtgaattaagtgatgatgaacaagaagaagttttagagagtaag
catatatcatatcaaaatgatgaatacaatttattcttcactaacagcgcatggttcatt
atgttaaggatgcatcaaatgctttgtgaaaggttattgaagatgaatcaacttgctgca
gaagctgcagcatttgaattaaatgataaaaaacatagaagagaggggacagcagttgct
ttgcacttaaaaaagatgccaacaactgatattgaggaatattatcctggatttttagtt
atggtgaaaaatttattggatggtcatacagattctaattcatttgaagattctttacgt
gaagcttttggagtaaattcgtatattgcatttacaatagataaactaattcaaaatatt
gttcgtcagcttcacagtcttgtaacagatgatattagtatgaaactttatgcattatat
gaagatgaacgtaggaatggtgcagcaggtggctcgtcaattactgccactgctagatct
gggttggagttagcttaccaaaagaaagtggaaaccctactttcagatgaaaattcatat
aaaatatattttcacaaggataatggcacatgcaaagccagtatagaacttcttcctaat
gaaggtgatttatctgaagatcaagctgaagttgagaaatggtcagaatatgttgagagg
tttgtaggtaactctgaagtcatgtctgaactcaaagagcatctatgtaaaaagcctata
tttttgttaaggaattcacgggttttgcagcgtttttcaaaacgacagaacaaacacaaa
aggaaaaagcgagatgaatgtgaagataatgatgagccaagtgaaagtgtttcatcttca
acatccgatgtcattatggacaacagattggagtgcaaaatcagtcaaaatacttataag
atgcgctacgtttcgggtacgagagatctaatgtttcgtagaagtacagttggaaaatct
cttaagtctcatccttcaatcaatatgcgtttgcattctatatataaaacttcccatgaa
gcatggctgcacgaaaacacaaccagggatcagtgtcaccagacagaactttggttcacc
ggaaaagacggctccgaagatatgatgtcgtgcataacgacaaaagacgtctttaaacac
ggtgggatcaatataaataaatattcagtaatttacacaaaagattctaaaaatggattt
aaaagtgcctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (35)   

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