KEGG   Hydrocarboniclastica marina: soil367_04680
Entry
soil367_04680     CDS       T06192                                 
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
hmi  Hydrocarboniclastica marina
Pathway
hmi00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:hmi00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    soil367_04680 (lysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:hmi01007]
    soil367_04680 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hmi03016]
    soil367_04680 (lysS)
Enzymes [BR:hmi01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     soil367_04680 (lysS)
Amino acid related enzymes [BR:hmi01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   soil367_04680 (lysS)
Transfer RNA biogenesis [BR:hmi03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    soil367_04680 (lysS)
 Prokaryotic type
   Other AARSs
    soil367_04680 (lysS)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d RMI2
Other DBs
NCBI-ProteinID: QCF25282
UniProt: A0A4P7XGH3
Position
1018792..1020306
AA seq 504 aa
MTDHENSNPALDENRLISERRAKLAEIRESNAIPFPNDFRRTATAAELQEKYGEKTKEEL
QDMAVEVAVAGRMMLDRKAFKVLQDTSGRVQIYAAKDVQKETRHWDLGDIVGVRGVLSKS
GKGDLYVTMDQYVLLTKALRPLPEKFKGLADQEQKYRRRYVDLIVSEDTRETFRLRSRIV
EQIRRYLVDRDFLEAETPMLQVIPGGASARPFVTHHNALNIDMYLRIAPELYLKRLVVGG
FERVFEINRNFRNEGLSTRHNPEFTMLEFYQAYADYNDLMNLTEDMLRTVARNALGKTVI
SNTVRNGEGEVTETREYDFGKPFERISVFDSILKYNPDIRPEQLQDIEQARALAKSLHLA
IKPGWGLGKLQIEIFEETVEHRLIQPTFITEYPTEVSPLARRSDSNPMVTERFEFFVGGR
EIANGFSELNDAEDQAERFRAQVAEKEAGDDEAMFYDEDYVEALEHGLPPTAGEGIGIDR
LVMLLTDSPSIRDVILFPAMRPAG
NT seq 1515 nt   +upstreamnt  +downstreamnt
atgactgaccacgaaaacagcaacccggcccttgatgagaatcggctgataagcgaacgc
cgcgccaagcttgcggagatccgggaaagcaatgccattccgttccccaacgattttcgc
cgtaccgcgaccgctgccgagctgcaggagaagtacggagagaagaccaaggaagagctg
caggacatggctgtagaggtggccgtggccgggcggatgatgctggaccgcaaggcgttc
aaggttttgcaggacacttccggccgcgtccagatatacgccgccaaagatgtccagaaa
gagacgcgtcattgggacctgggtgacatcgtcggcgtcaggggcgtgctcagcaagtca
ggcaagggcgacctctatgtcaccatggatcagtacgtgctgctgaccaaagccctgcgg
ccattgcccgaaaagttcaagggcctggctgaccaggaacagaagtaccggcgtcgttat
gttgacctgatcgtcagcgaagacactcgcgagacctttcgcctgcgctcgagaatcgtt
gagcagatccgccgctacctggtcgatcgcgacttccttgaggctgaaacgcccatgctt
caggttattccaggcggcgccagcgcccggccgttcgtgacccaccataatgccctgaac
atcgacatgtacttgcgcatcgcgcccgagctttatctcaagcgtctggtggttggtggc
tttgaacgcgtgttcgagatcaaccgcaattttcggaacgaggggctttcgacacggcac
aatcctgagttcaccatgctggagttctatcaggcttatgcggattacaacgatctgatg
aacctgactgaggatatgctgcggaccgtggcacgtaacgccctggggaaaacggtcatt
agcaatacggtcagaaacggcgaaggtgaagttactgaaacgcgcgagtatgacttcggc
aagccgttcgagcgcatctcggtgttcgacagtatactcaagtacaacccggatattcgg
cccgagcagcttcaggatattgaacaggcgagggcgttggcgaaatcgctgcatctggcc
ataaagccaggttggggactgggaaagctgcagatcgagattttcgaggagaccgttgaa
catcggttgatccagcccaccttcattactgagtacccgaccgaagtgtcgcccctggcc
cgccggagcgattccaatcccatggtcaccgagcgctttgagttctttgtaggtggccgg
gaaatcgccaatggtttttctgagctcaacgatgccgaagatcaagctgagcgttttcgt
gctcaggtggcggagaaagaagcgggggacgacgaggccatgttctacgacgaagattac
gtagaagcactcgagcacggcctgccgccgacggcaggtgaggggatcggcatagaccgg
ctggtgatgctgctgaccgactcaccgtccatccgtgacgtaatcttgtttcccgcaatg
cggccggcaggctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (21)   

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