KEGG   Hydrocarboniclastica marina: soil367_10790
Entry
soil367_10790     CDS       T06192                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
hmi  Hydrocarboniclastica marina
Pathway
hmi03030  DNA replication
hmi03430  Mismatch repair
hmi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hmi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    soil367_10790
   03430 Mismatch repair
    soil367_10790
   03440 Homologous recombination
    soil367_10790
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hmi03032]
    soil367_10790
   03400 DNA repair and recombination proteins [BR:hmi03400]
    soil367_10790
Enzymes [BR:hmi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     soil367_10790
DNA replication proteins [BR:hmi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     soil367_10790
DNA repair and recombination proteins [BR:hmi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     soil367_10790
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 DNA_pol_IIIA_C tRNA_anti-codon tRNA_anti_2 SSB PPP1R21_C
Other DBs
NCBI-ProteinID: QCF26384
UniProt: A0A4P7XIM6
Position
complement(2416224..2419706)
AA seq 1160 aa
MSAAFVHLRVHSEYSLVDGLVRIKPLFKRVAELDMPAIALTEQSNMFSLVKFYKGALGAG
VKPIVGADLWLENPDEPQNPFLLPLLATNADGYRHLTEIISLGFTEGQVFDKPLIKREWI
EARSGGLIALSGAKAGDVGRALLNGKSDLARQRAEYWLALFPDRYYLELQRASRVNDEEC
LHLSMGLATELDIPVVATNEVQFLAQDDFEAHEARVCIGESRTLDDPRREHRFSDQQYLK
SAEEMAALFEDIPEALENTLAIAERCNVPVRLGEYFLPQFPVPDGLTMDEFFIKVSEEGL
EDRLKTILDPNAPDYAERRQVYFTRLKFELDIILEMGFPGYFLIVMDFIKWAKQNGVPVG
PGRGSGAGSLVAYSQLITDLDPLQYDLLFERFLNPERVSMPDFDVDFCMEGRDRVINYVA
EKYGRNAVSQIITFGTMAAKAVVRDVARVQGKSYGLADKLSKLIPFEVGMTLEKAVEQEP
ALREFLEIDEEAQEIWEMARKLEGVARNAGKHAGGVVIAPTNLTDFAPLYCEPDGTSLVT
QFDKNDVEEAGLVKFDFLGLRTLTIIDWALKMVNARRRRQGLLDLDIESIPLDDGPSFEL
LKKADTTAVFQLESRGMKDLIRRLQPDSLEDMIALVALFRPGPLQSGMVDDFIDRKHGRQ
PVSYPHPDFQYAGLKPVLEPTYGIILYQEQVMQIAQVMAGFSLGEADLLRRAMGKKKPEE
MAKQKTIFIEGCANNGIDQQLAENIFDLVEKFAGYGFNKSHSAAYALVSYQTLWMKTHYT
AEFMAAVLTADMQNTDKVVTLVEECRNLKLELVLPDVNTSEYTFTVNDAGEVVYGLGAIK
GLGEGPIESLVAARRNGGPFRDLFDFCARVDMRKVNKRALEALIRAGALDKQGPSRAQLM
ASIEKAVQQAGQQSRNADAGMGDLFGEDLIPEGQDDPYVEVAHLREWSDKARLQGEKDTL
GLYLTGHPFDEYEREVRRFAPNAIAQLKPGKGTQRIAGLLVAFRTMKNKRGQTMAFATLD
DRSARIEIAMFSETFDQSREALQKDAVLIVEGNISYDDYNGSLKVRAEAVYDVAEARRRY
SRGLKLAIDHKQLGNGLMDELTAVLRPYRAEGCRVSVDYARADARTQIQLGADWQVLPDD
ELLLGLRRLLGDDRVNLVYE
NT seq 3483 nt   +upstreamnt  +downstreamnt
atgtctgcagcttttgttcatttgcgagtccattcagaatattcactggttgacgggctg
gtccgcataaagccgctattcaagcgggtggccgagctcgacatgccggctattgctctg
accgaacagtcgaacatgttttcgctggtgaagttctacaaaggcgcgctgggtgccggg
gttaagccgatagtgggcgctgatctctggctggaaaatcctgacgaaccccagaatccg
ttcctgctgccattgctggccaccaacgctgacggctaccgccatctgaccgaaatcatt
tctctcggctttacggaaggccaggttttcgacaagccgctaatcaaacgcgagtggatt
gaagcccgctcaggtggactgattgcgctgtccggcgccaaagcgggcgacgtgggtcgc
gctcttctgaacggtaagtccgacctggcgcgtcagcgggccgagtattggctggccctg
tttcctgaccgttactacctggagctgcaacgggccagccgggttaacgacgaggagtgc
ctgcacctgagcatgggtttggcgaccgagttggatattcccgtggtggccaccaatgag
gtgcagtttctggcccaggacgacttcgaggcacacgaggctcgcgtgtgtatcggcgaa
agccggacgctggatgacccgcggcgcgaacatcggttcagtgaccagcagtatctgaag
tccgcggaagaaatggcggccctgttcgaggacattccggaagcactggagaacactctg
gcgattgccgagcgctgcaatgtgccggtccggctcggggagtacttcctgccccagttc
ccggttcccgatgggctgaccatggatgagttcttcatcaaggtatccgaagaggggctt
gaagaccgcctgaaaacgattctcgacccaaacgcacccgattatgcggaacgcaggcag
gtctattttacgcgcctgaagttcgagctcgatatcattctggagatggggttcccaggc
tactttctgatcgtcatggacttcatcaagtgggccaaacagaacggcgtaccggtgggg
ccgggccgggggtcaggcgccggctctctggttgcatattcgcagctgattaccgatctt
gacccgctacagtacgacctgctgttcgagcgctttctaaatccggagcgggtgtccatg
cccgacttcgacgtcgacttctgtatggaaggccgcgaccgggtcatcaactacgtcgcc
gaaaaatatggccgcaatgctgtttcccagataatcacgttcggcaccatggctgcgaaa
gcggtggttagggacgtggcccgggtgcaaggcaagtcctacggcctggccgacaagctg
tccaagctgattcccttcgaagtgggcatgacccttgaaaaagcggtcgaacaggagccg
gccctgagagagttcctggagattgacgaagaagcccaggaaatctgggagatggcacgc
aagttggagggtgttgcgcgtaacgccggcaaacacgccggtggcgtggtcatcgcaccc
accaatctgactgattttgcaccgctgtactgcgagcctgatggcaccagtctcgtaacc
cagttcgacaagaacgatgtggaagaggccgggctggtcaagttcgacttcctggggtta
aggacgctcacgattatcgattgggcgctgaaaatggttaacgcccgccgccgtcgccag
gggctgctcgatctggacattgagtctattccactggatgacggcccgtcgttcgagctg
ttgaagaaagccgataccacagcggtgttccagctggaatcccgcggcatgaaggatctg
atccggcgcctgcagcccgactccctggaagacatgatcgccctggtggcgctgttccgg
ccgggtcccctgcaatcgggcatggtggacgactttatcgaccgtaaacacggtcgccag
ccggtatcctatcctcatcccgactttcagtacgccgggctcaaaccggtgctggagccg
acctatggcatcatcctgtatcaggaacaggtcatgcagattgcccaggtcatggctggg
ttctcgctgggtgaggctgacctgctgcgccgtgccatgggtaagaaaaagcccgaggag
atggccaagcagaagaccatctttattgagggttgcgccaacaacggcatagaccagcaa
ttggctgagaacatcttcgatctggtagaaaagttcgcggggtacggtttcaacaaatcc
cactctgccgcctatgccctggtgtcgtatcagaccctttggatgaaaacccactacacc
gccgagttcatggccgcggtgcttacggcggacatgcagaatacggacaaagtggtaacc
ctcgttgaggaatgccgtaatctcaagctcgaactggtcctgcctgacgtcaataccagc
gaatacaccttcaccgttaacgatgccggtgaagtggtgtatgggcttggcgcgataaag
gggctgggcgagggccctatcgaaagcctcgtcgctgcccggagaaacggcgggccattc
agggatctgttcgacttctgcgcccgcgtcgatatgcgcaaggtcaacaaacgggcgctg
gaagccctgattcgggcgggggcgctcgacaaacagggacccagccgcgcgcaattaatg
gcaagcatcgaaaaagcagtgcaacaggcgggtcagcaaagccggaacgccgacgcgggc
atgggtgacctgtttggggaagacctgattcccgaaggccaggatgacccgtatgtagaa
gttgcgcacctgcgggaatggagcgacaaggcccgcctccagggtgagaaagatacgctg
ggactttacctgaccggccacccttttgatgagtatgagcgagaagtccggcgctttgcg
cccaatgccatcgcccagctgaagccaggcaagggcacccaacgtatcgccggcttgctg
gtggccttccggaccatgaagaacaagcgtggccagaccatggcgtttgcgacgcttgac
gaccgcagcgcacggattgagatcgccatgttttccgagacgttcgatcagagtcgggaa
gcactgcagaaagatgcggtgctgatcgttgaaggcaatatcagttatgacgactacaac
ggttcgctgaaggtgagggccgaggcggtgtacgatgtggcagaagcccggcggcgctac
agccgcggcttgaagttggctattgaccacaagcagctgggcaacggcctgatggacgag
ctaactgcggtgctacgcccctatcgggcagaagggtgccgggtcagtgtcgactacgca
cgcgcagatgcccgtacccaaattcagctgggcgctgactggcaggtcttgccagatgat
gagcttctgcttgggctgcggcgcttgctgggtgatgaccgggtcaatctggtctacgaa
taa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (21)   

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