KEGG   Helicobacter mustelae: HMU02160
Entry
HMU02160          CDS       T01191                                 
Symbol
exoA
Name
(GenBank) putative exodeoxyribonuclease
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
hms  Helicobacter mustelae
Pathway
hms03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hms00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    HMU02160 (exoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hms03400]
    HMU02160 (exoA)
Enzymes [BR:hms01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     HMU02160 (exoA)
DNA repair and recombination proteins [BR:hms03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     HMU02160 (exoA)
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-ProteinID: CBG39478
UniProt: D3UG57
Position
266540..267292
AA seq 250 aa
MRLISWNVNGLRACMNKGFMDFFRQIDADIFCIQESKMHPDQADFVFDGYHGYWNSAEKK
GYSGVVVLSKQEPLCVEYDMGIEHHDKEGRVICAEYPDFYLINVYTPNSKRELERLEYRM
QWEDDFLNFLKNLERKKPLIICGDLNVAHKEIDLKNPKTNRRNAGFTDEEREKMTTLLEN
GFIDTFRYFYPDLEGAYSWWSYMGRARQNNTGWRIDYFLCSEILQKRLIEAKIYSEILGS
DHCPVGLVIS
NT seq 753 nt   +upstreamnt  +downstreamnt
atgcgattgatttcatggaatgtgaatggactgcgtgcttgtatgaacaagggttttatg
gattttttcagacaaattgatgcagatattttttgtatccaagaatccaaaatgcatcca
gatcaggcagattttgtttttgatggttatcatggctattggaatagtgcagaaaaaaag
ggctattctggagtggtggttttgagcaagcaagagcctctttgtgtggaatatgatatg
ggtatagagcatcatgacaaagaggggcgcgtgatttgtgcggaatatccagatttttat
ctaatcaacgtttacacacccaattccaagcgcgagcttgagagattggaatatcgcatg
cagtgggaggatgattttttgaattttctcaaaaatttagagcgaaaaaagcccctgatt
atttgcggagacctcaatgtcgcgcataaagaaatcgatcttaaaaaccccaaaacaaac
cgcaggaatgctgggtttactgatgaggagcgggaaaaaatgaccactctcttggaaaat
ggatttattgatacctttcgatatttttatcccgatctagagggggcttacagctggtgg
agttatatgggcagggcgcgccaaaacaacacgggatggagaattgattattttttgtgc
tcagagattttgcaaaaaagactcattgaggccaagatctattcagagattttggggagc
gatcactgccctgtgggtttggtgatttcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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