KEGG   Hyphomonas neptunium: HNE_3441
Entry
HNE_3441          CDS       T00397                                 
Symbol
pnpA
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
hne  Hyphomonas neptunium
Pathway
hne03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hne00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HNE_3441 (pnpA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hne03019]
    HNE_3441 (pnpA)
   03016 Transfer RNA biogenesis [BR:hne03016]
    HNE_3441 (pnpA)
Enzymes [BR:hne01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     HNE_3441 (pnpA)
Messenger RNA biogenesis [BR:hne03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     HNE_3441 (pnpA)
Transfer RNA biogenesis [BR:hne03016]
 Prokaryotic type
  tRNA degradation factors
   HNE_3441 (pnpA)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1
Other DBs
NCBI-ProteinID: ABI76481
UniProt: Q0BWM9
Position
complement(3579558..3581699)
AA seq 713 aa
MFNKQSVSLEWAGRTLTIETGQVARQADGAVMVQYGDTIVLATAVFAKEAKPGQDFFPLT
VNYQEKYFASGRIPGGFFKREGRPTEKETLTSRLIDRPIRPLFVDGFKHEVQVVVTTLSY
DLENDADIIALVGASAALVLSGAPFMGPIGAARVGYKDGQYIINPTIAELEESELDLVVA
GTTDAVMMVESQAAELSEDVMLGAVVAGHDAMQPVIDAIIALAEKAAKEPFAYEPPDHSA
ALKSVIDTVGADLSKAYKITAKGERYAAIGAAKDKAKAALLGTDEAPGVMTPEVFKTVFK
EAEASVVRGDILKTGQRIDGRKLDQIRPIVAEAGFLPRTHGSSLFTRGETQAICVATLGT
SDDEQYIDGLDGTKKEKFMLHYNFPPYSVGETGRMGGAGRREIGHGKLAWRALKAVLPKH
EDFPYTIRMVSEITESNGSSSMATVCGCSLAMMDAGVPLTRPVSGIAMGLILEGSEFAVL
SDILGDEDHLGDMDFKVAGTENGVTSLQMDIKVAGITKDIMGKALEQAKGGRMHILGEMG
KALTASRGQLSENAPQMEIIKVPTDKIRDVIGSGGKVIRGIVDETGAKVNIDDDGTVQIS
AMDRKSIDAAIKMIKGITAEAEVGEIYEGKVVSMKDFGIFVNFFGPKDGLVHVSQMANKR
IGHPKEMVKEGDKVWVKLMGFDERGKVRLSMKVVDQETGKELAEEAGDDASED
NT seq 2142 nt   +upstreamnt  +downstreamnt
atgtttaacaagcaatccgtgtcgctggaatgggctggccgcacgctgacaatcgagacg
ggccaagtggcacgtcaggccgatggcgccgtcatggtgcagtacggcgataccattgtc
ctcgcgaccgccgtgttcgcgaaggaagcaaaaccgggtcaggacttcttccccctgacc
gtgaattaccaggaaaagtacttcgcctccggccggattcccggcggattcttcaagcgc
gaaggccgccccaccgagaaagagacgctgacctcgcgcctcatcgaccgtccgatccgt
ccgctgttcgtcgacggtttcaagcatgaagtccaggtcgtcgtcacgacgctgtcctat
gacctcgagaatgatgccgacatcatcgcgctcgtcggcgcctctgcggcgctggtgctt
tccggcgcgcccttcatgggcccgatcggcgctgcgcgcgttggctacaaagacggccag
tacatcatcaacccgacgattgccgaacttgaagagtccgagcttgacctcgtggttgcc
ggcaccaccgacgccgtgatgatggttgaatctcaggcggctgagctttccgaagacgtg
atgctcggcgctgttgtcgccggtcatgacgcgatgcagccggtgatcgatgcgatcatt
gcgctggcagaaaaagcggcgaaagagccgtttgcttatgagccgccagaccattcggct
gccctcaaatcggtgatcgacactgtcggcgccgatctgtcgaaagcctacaagatcacc
gccaagggcgagcgttatgctgccatcggcgcggccaaggacaaggcgaaagctgccctt
cttggtacggatgaagcccccggcgtgatgacgccggaagtcttcaagaccgtgttcaag
gaagcggaagcttctgttgtgcgcggcgacatcctgaaaaccggtcagcggatcgacggg
cgcaagctcgaccagatccgcccgatcgttgccgaagccggcttcctgccgcgcacgcat
ggttcgtcgctgttcacgcgcggcgagacgcaggcgatctgcgttgccacgctcggaacg
tccgatgacgaacagtacatcgacggtctggacggcacgaaaaaagaaaagttcatgctg
cactacaacttcccgccctattcggtcggggagacgggccgcatgggcggcgcaggccgc
cgcgagatcggccacggcaaacttgcctggcgcgcgctcaaggctgttctgcccaagcat
gaagactttccgtacacgatccgtatggtctccgagatcaccgagtcgaacgggtcttcc
tcgatggcgactgtttgcggttgctcgctggccatgatggatgcgggcgttccgctgacc
cgtccggtctcgggcattgccatgggcctcatcctcgaaggctccgagtttgcggttctc
tccgacatcctcggcgacgaagaccacctcggcgacatggacttcaaggttgccggtact
gaaaacggcgtgacctcgctccagatggacatcaaggttgcgggcatcaccaaggacatc
atgggcaaagcccttgagcaggccaaaggcggccggatgcacatcctcggtgaaatgggc
aaggccctgaccgcttcgcgcggccagctgtcggaaaacgcgccgcagatggaaatcatc
aaggtgccgaccgacaagatccgtgatgtgatcggttcgggcggcaaggtcatccgcggc
atcgtcgacgagacgggcgccaaggtgaacatcgatgacgatggcacggttcagatttcg
gcgatggatcgcaagtcgatcgatgccgcgatcaagatgatcaagggcatcacggcggaa
gccgaagtcggcgagatctacgaaggcaaagtcgtttccatgaaggacttcggtatcttc
gtgaacttcttcggccccaaggacggcctcgtccacgtctcgcagatggccaacaagcgc
attggccaccccaaggagatggtcaaggaaggcgacaaagtgtgggtgaagctcatgggc
ttcgatgagcgcggcaaggtccgcctctccatgaaggtcgttgaccaggagaccggcaag
gagcttgctgaagaagcgggcgacgacgcttcggaagactag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (5)   
   Pfam (5)   
All databases (51)   

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