KEGG   Hyphomicrobium nitrativorans: W911_01600
Entry
W911_01600        CDS       T02943                                 
Name
(GenBank) DNA mismatch repair protein MutS
  KO
K03555  DNA mismatch repair protein MutS
Organism
hni  Hyphomicrobium nitrativorans
Pathway
hni03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hni00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    W911_01600
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hni03400]
    W911_01600
DNA repair and recombination proteins [BR:hni03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     W911_01600
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_IV MutS_II AAA_29
Other DBs
NCBI-ProteinID: AHB47384
UniProt: V5SBN8
Position
346868..349681
AA seq 937 aa
MAGRERRRNESGEGDGAAAAAAAVSAFADATPSMAQYLEIKTANPDSLLWYRMGDFYELF
FEDAVVASQALGIVLTKRGKHRGEDIPMCGVPVHRADEYLERLIRRGYRVAVCEQLEDPA
EARKRGAKAVVRRDVVRLVTPGTLTEETLLDARARNYLTALFQAPGGPEGPLIGSTATVA
LASLDISTGEFEVGETRGVDLPGELVRLAPGEVIAADSVLAEADLTAWIERAGGAATPVP
AASFDGLAGERDLKARLGVADLGAFGVFTRSEMAAIGALLRYVDLTQIGKKPIVRPPRRM
GSGAALTIDAATRASLELVRSTSGEKSGSLLDAIDCTVTGPGARELAARLAAPLSDPAGI
EARLDAVAFLVDDEAVRDALREALKGVPDLARAVSRLAFGRGGPRDLAGIAQGLDAADAI
GRLLASKSQKIDFPSELQQLFARIEGQGADLLALLKAALVDDPPHLKRDGGFVRRGYRPA
LDEALALRDDSRRVMAALETRYVDETGVKTLKVRHNNILGYFIEVTQANAKPMLDAPLNE
TFRHRQTMANAVRFTTVELVETEGRIASAADRALALEQDVFAELTAAVAAAERMLSDVAA
ALAELDHTAALAHLAHHERYVRPVVDASHAFEIRAGRHPVVEQALKRARGGPFVANDCVL
GRTETVPLPPGFDEMPDARIWLVTGPNMAGKSTFLRQNALIAVLAQMGSFVPAAEAHIGV
VDRLFSRVGAADDLARGRSTFMVEMVETAAILNQATARSLVVLDEIGRGTATFDGLSIAW
AAVEYLHEETQARVLFATHYHELTALAGRLASVANVTMDVKEWRDEIVFLHRVKAGAADR
SYGIQVAKLAGLPPPVIERAREVLALLETSDRKRGSKNGPLEELPLFAAARPQSVLQARG
PGPLETALDALNPDELTPRAALDALYRLKRIRSDEPG
NT seq 2814 nt   +upstreamnt  +downstreamnt
atggcgggacgagagcgacgtcggaacgagagcggagagggcgacggcgcagcggctgct
gcggccgctgtctctgcctttgccgatgcgacgccctcgatggcgcagtacctggagatc
aagaccgccaatcccgacagcctgctctggtaccggatgggcgatttctacgagcttttc
ttcgaagacgcggtcgtcgcgtctcaagcgctcggcatcgtgctcaccaagcgcggcaag
caccggggcgaagacatccccatgtgcggtgttcccgttcaccgggctgacgaatatctc
gaacgcctgatccggcgcggctatcgcgtcgccgtctgcgagcagctcgaagatccggcg
gaggcgcgcaaacgcggcgccaaggccgtcgtgcggcgcgacgtggtgcggctcgtcacg
cccggcaccctgaccgaagaaacgctgctcgatgcgcgcgcgcgcaattatctgaccgcg
ctctttcaggcaccgggcgggccagagggaccgctgatcggctcgaccgccacggttgcg
ctcgcctctctcgacatctcgaccggcgagttcgaggtgggcgagacgcggggcgtggat
ctgccgggtgagctggtgcggctcgcaccgggagaggtgatcgccgccgatagcgtgctc
gcagaagccgatcttacggcgtggatcgagcgggcgggcggggctgcgacgccggtgccg
gcggcctccttcgacggcctcgcgggcgagcgcgatctcaaggcgcgcctcggggttgcg
gatctcggagcattcggcgttttcacacgtagcgagatggccgccatcggcgcacttctg
cgctacgtggaccttacccagatcggaaagaagcccatcgtgcgcccgccgcgccgcatg
ggcagcggagcggctctcacgatcgatgcggcgacgcgcgcgagcctcgaactcgtgcgg
tccacatcgggcgagaaatcgggcagccttctcgatgccatcgattgcactgtgacggga
cccggtgcgcgggagctggccgcgcgtcttgcggccccgctctccgatcccgcgggcatc
gaagcgcgcctcgacgcggtggcctttctggtggacgacgaggcggtgcgcgacgcgttg
cgagaggcgctcaagggcgttcccgatcttgcgcgcgcggtttcgcgcctcgcgttcggg
cggggcggaccgcgcgatctcgccggcatcgcgcaagggctcgatgctgccgatgccatc
ggccgtctgctcgcctccaaatcgcaaaagatcgattttccctccgagcttcagcagctc
ttcgcgcggatcgagggacagggcgcggatctcctcgcgctgctcaaggcggcactggtg
gacgaccctccccatctcaagcgcgatggcgggttcgtaaggcgcggataccgccccgcg
ctggacgaggcgctggcgctgcgcgacgacagccgccgcgtgatggccgcgctcgaaacc
cgctacgtggacgagacgggcgtgaaaacgctgaaggtgcgccacaacaatattctcggc
tacttcatcgaggtgacgcaggccaacgccaagccaatgctggacgcgccgctcaacgaa
acgtttcggcaccgccagacgatggcgaacgccgtgcgcttcacgactgttgaactcgtg
gaaacggaagggcgcatcgcgtccgccgcagatcgcgcgctggctctcgaacaggacgtg
ttcgccgagctgaccgccgccgtcgcggccgccgaacgcatgctgtccgatgtcgcggcc
gcgcttgcggagctggaccacaccgccgcgcttgcccatctcgcgcatcacgagcgctac
gtgcggccggtggtcgacgcgagccacgcgttcgagattcgcgccgggcgccatcccgtg
gtggagcaggccttgaagcgcgcacgcggcgggccgttcgtcgccaacgattgcgtgctc
gggcgcaccgaaaccgtaccgctcccgcccggcttcgacgagatgccggatgcgcggatc
tggctcgttaccgggcccaacatggcgggtaaatccacgttcctgcgccagaacgcgctg
atcgccgtgctcgcgcagatgggctcgttcgtacccgcagccgaggcccatatcggtgtg
gtcgatcgcctcttcagccgcgtcggcgctgccgacgatctcgcacgcgggcgatccacg
tttatggtcgagatggtcgaaacggccgccatcctgaaccaagccacggcccgctcgctc
gtcgtgctcgacgagatcggacgcgggacggcgaccttcgacgggctctccatcgcgtgg
gcggccgtcgaatacctgcatgaggagacgcaggcgcgggtgctgttcgcgacccactat
cacgagctgacggcgctggccgggcggctcgcgtcggtcgccaacgtcaccatggacgtc
aaggaatggcgcgacgagatcgtgttccttcaccgcgtgaaggcgggggccgccgaccgc
tcctacggcatccaggtggccaagctcgccgggctgccgccgcccgtcatcgagcgcgca
cgcgaggtgctggcgcttctcgaaacgtcggaccgcaagcgcgggtcgaagaatgggccg
ctcgaagagctgccactgttcgccgccgcccgcccccaaagcgtgcttcaggcccgcggg
ccaggaccgctcgaaaccgcgctcgatgcgcttaaccctgacgagttgacgccgcgcgcc
gctctcgatgcgctttatcgcctgaaacgtattcgctcggacgagccgggctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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