KEGG   Hyphomicrobium nitrativorans: W911_05985
Entry
W911_05985        CDS       T02943                                 
Name
(GenBank) hypothetical protein
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
hni  Hyphomicrobium nitrativorans
Pathway
hni03420  Nucleotide excision repair
hni03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hni00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    W911_05985
   03430 Mismatch repair
    W911_05985
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hni03400]
    W911_05985
Enzymes [BR:hni01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     W911_05985
DNA repair and recombination proteins [BR:hni03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     W911_05985
   MMR (mismatch excision repair)
    Other MMR factors
     W911_05985
SSDB
Motif
Pfam: UvrD-helicase AAA_19 AAA_30 AAA_11
Other DBs
NCBI-ProteinID: AHB50011
UniProt: V5SGL5
Position
complement(1256323..1258299)
AA seq 658 aa
MIQIPPLTEQLLAELGEELGGCDFTSEDQQRFLSATESCDVQAAPGNGKTTLLVAKLALL
SRSWTSRKRGVCVISHTNAAREEIEKKLATHSLASAFLAYPHFIGTVTGFIDRFVALPYL
RGLGWGVQRIDDDVFGAIGGSRWRSKPALVTYSEINKGINKRRLEEFVRKLELSEEFVCE
AEIPPQRLKVSARAGQPSPQRPTGQALEELKAEITNDGFYRFGDMTALAQQAITRFPEII
QRVRARFPLVLLDEAQDTNGAQLALVNQLFAEGVAYQRLGDQNQTLYEDDDLTPDDYWRA
AEDAIPLNKTRRFGTDIASFASRLTVRAPQIIEGVEDAPSRRSLILFDRNSIAGVLPAYA
GEVRAYWGQDPGAHLDIRAVASRHNPAAAGRGDWPKTLIDYCPQYRSGRGRQSRPDTLCS
VLRQAAILHASHGSPAEIADLMMSGLVILLRHHGVKDERGELATKRSISSILQRRDPKLQ
LKIRRLMRDRVVLGASAWNEDDWSQLRDELKSLLGMDALSDAARQYLEFVGHGATAAQGE
RASTVFIHEGMEIKLGSIHSVKGRTVDSILVVETEVWRGTSRDQQAMDLATVLPHAFGLE
NKDFSANAAQLAAATNVFVAVTRPRKVLCCAMRKIAASDELVAAARAQGWNIIDLTLL
NT seq 1977 nt   +upstreamnt  +downstreamnt
atgattcagattccgccgctcaccgaacaactgctggcggaactgggagaagaacttggc
ggctgcgattttaccagcgaagatcagcagcgtttcctgtcggcaaccgaatcctgcgat
gtgcaggcggcgcccggaaacgggaagacaacgctgctcgttgccaagctcgccttgctc
tctcgaagctggacatcccgcaagcgcggcgtatgcgtgatatcgcataccaatgccgcc
cgcgaggagatcgagaaaaagctggcaactcactctttggcttcggcctttctggcttat
ccgcacttcattggaacggtgacgggcttcatcgaccgcttcgtggcactgccttacctt
cgtggtctcggctggggagtgcagcgaattgatgatgacgtgttcggagccatcggcggt
tcgcggtggcggtcgaagcccgcgttggttacttactccgagatcaacaaaggtatcaat
aaacgccgcctcgaagagttcgttaggaagctggagctatctgaagagtttgtatgtgag
gctgagattccgcctcagcgattgaaggtatctgcacgagccgggcagccaagcccgcag
cgccctacgggacaggcgctcgaagagctaaaagccgaaatcaccaatgacgggttttat
cggttcggcgacatgacagcgcttgcccagcaggccatcacaagattccccgaaatcatt
cagcgcgtgcgcgctcggtttccgctggttctgctggacgaagcgcaagacactaacgga
gcgcagcttgccctcgtcaatcagctattcgcagagggcgtggcttaccagcgcttagga
gatcaaaaccagaccctctacgaggacgatgatcttacgcccgatgattactggcgcgca
gccgaggatgccatcccacttaacaagacgcgccggttcggtactgacatcgcttcattt
gccagtcgcctcacggtcagggctccgcaaataatcgagggggttgaagatgctcccagc
aggcggagtcttattctctttgatcgcaattcaatcgctggcgtgctcccggcatatgcg
ggcgaggtgcgggcgtattgggggcaagatcccggggctcatctggatatccgtgcggtc
gcttcccgtcacaatccggcagcggcgggaagaggtgactggcccaagacgttgatcgat
tattgtccgcaatacagaagcggacgcgggcgacagagccgccccgacacactttgcagc
gtcttgcgacaggcagccatccttcatgcgtcgcacggatcgccagcggagatagcagat
ctcatgatgtccggtctggtcatcctcttgcgccatcacggcgtaaaagacgaacgggga
gaactcgccaccaagcgatccatttcgagcatcctgcaaaggcgtgacccgaagctacaa
ctgaaaatcaggaggctgatgcgagatcgggttgtgttgggagcttcggcttggaacgag
gatgactggagtcaattgcgcgatgagctcaaatcgttgctgggcatggacgctctctca
gatgcagcgaggcaatatctggagttcgtaggccacggggcaaccgccgcgcaaggcgag
cgggcgtcaacggtattcatccatgagggcatggagatcaaactgggctccattcattct
gtgaagggcaggacagtcgactcgatccttgtcgtcgagaccgaagtttggcgcggaaca
tctcgtgaccaacaggcaatggatctggctacggtgctgcctcacgccttcggcctcgag
aacaaggattttagcgccaacgcggcccaacttgctgccgccaccaatgtcttcgtggcc
gtaacgcggccccgaaaagtgctttgctgcgccatgcggaagatagcagcatcggatgag
ttggttgccgctgctcgcgcacaagggtggaatatcatcgatctgacgctgctttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system