KEGG   Hyphomicrobium nitrativorans: W911_08430
Entry
W911_08430        CDS       T02943                                 
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
hni  Hyphomicrobium nitrativorans
Pathway
hni03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hni00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    W911_08430 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hni03400]
    W911_08430 (ruvB)
Enzymes [BR:hni01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     W911_08430 (ruvB)
DNA repair and recombination proteins [BR:hni03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     W911_08430 (ruvB)
    RecFOR pathway proteins
     W911_08430 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 Mg_chelatase AAA_16 AAA_2 nSTAND3 Rad17 AAA_18 AAA_3 AAA_14 NTPase_1 TsaE AAA_17 RNA_helicase NB-ARC AAA_28 AAA_33 NACHT DUF815 AAA_24 Zeta_toxin IstB_IS21
Other DBs
NCBI-ProteinID: AHB48410
UniProt: V5SEC9
Position
1756463..1757503
AA seq 346 aa
MTDRLISGAKREADVYETSIRPRSLTEFVGQEQARANLRVFIEAAKSRGDALDHVLFAGP
PGLGKTTLAQIVAKELGVGFRATSGPVISKAGDLAALLTNLEERDVLFIDEIHRLTPAVE
EILYPALEDFQLDLIIGEGPSARSVRIDLAKFTLVGATTRLGLLTTPLRDRFGIPVRLNF
YTVEELESVITRGARVLGAAISPDGAVEIARRARGTPRIAGRLLRRVRDFAAVAGAPIID
ARVADKALSALEVDQAGLDSLDHRYLACIVHNYEGGPVGIETLAAALSEPRDALEEIVEP
FLLQQGFIGRTPRGRVATLKTYRHLGLSGPARAATPELPIFEEGEE
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgaccgaccgcctcatcagcggagcgaaacgcgaggcggacgtctacgagacgtcgatc
cggccgcgttcgctcaccgaattcgtgggccaggagcaggcgcgcgcgaacctgcgcgtg
ttcatcgaggccgccaagtcgcggggcgacgcgctcgaccacgtgctgttcgccggcccg
ccagggctcggcaagacgacgcttgcgcaaatcgtcgctaaggagcttggcgtcgggttc
cgcgcgacgtcgggccccgtgatttcgaaagcgggcgatcttgcggctctgctcaccaat
ctcgaagagcgcgatgtgctgttcatcgacgagatccatcgcctgacgccggcggtggag
gaaatcctttatcccgcactcgaagacttccaactcgatctcatcatcggcgaggggccg
agcgcgcggtcggtccggatcgatcttgcgaagtttacgctggtcggtgcgacgacgcgg
ctcggtctgctgacgacgccgctacgcgaccgcttcggcattccggtgcggctcaacttc
tacacggtcgaggaactggagagcgtgatcacgcgaggcgcgcgcgtgctgggcgctgcg
atttcgccggacggtgcggtcgagatcgcgcggcgcgcgcggggtacgcccaggatcgcg
ggccgtctgcttcggcgcgtgcgggatttcgcggcggtcgcgggcgcgcccatcatcgat
gcacgtgtggcggataaggcgctgagtgcgctcgaagtcgatcaggccgggctcgattcg
ctcgatcaccgctatctcgcgtgcatcgtgcacaactacgagggcggccccgtcggcatc
gagacgctggcggccgcgctgtccgagccgcgggatgcgctcgaagagatcgtcgagccg
tttctgttgcagcagggtttcatcgggcgtacgccgcgcgggcgcgtggcgacgctgaag
acatatcggcacctcgggctttcggggcccgcgcgggcggcaacgccagagttgccgatt
ttcgaagagggtgaggagtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (26)   
   Pfam (26)   
All databases (36)   

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