KEGG   Hyphomicrobium nitrativorans: W911_11025
Entry
W911_11025        CDS       T02943                                 
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
hni  Hyphomicrobium nitrativorans
Pathway
hni02024  Quorum sensing
hni03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hni00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    W911_11025
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    W911_11025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hni03019]
    W911_11025
   03036 Chromosome and associated proteins [BR:hni03036]
    W911_11025
Messenger RNA biogenesis [BR:hni03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     W911_11025
Chromosome and associated proteins [BR:hni03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    W911_11025
SSDB
Motif
Pfam: Hfq
Other DBs
NCBI-ProteinID: AHB48811
UniProt: V5SD70
Position
2292260..2292505
AA seq 81 aa
MAADRAQNLQDTFLNHVRKSKTPLTIFLVNGVKLQGIVTWFDNFCVLLRRDGHSQLVYKH
AISTIMPGAPVHLMEAESDGQ
NT seq 246 nt   +upstreamnt  +downstreamnt
atggccgcagatcgcgctcagaacctccaggacaccttcctcaatcacgtccgcaaaagc
aaaacgcccctcacgatttttctcgtcaacggggtcaagcttcaaggcattgtgacctgg
ttcgataatttttgcgtactccttcgcagagacgggcattcgcagctggtttataagcat
gcgatctcgaccatcatgccgggtgcgccggttcatttgatggaagcggagtccgacgga
cagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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