KEGG   Hymenobacter nivis: DDQ68_18400
Entry
DDQ68_18400       CDS       T05498                                 
Name
(GenBank) integration host factor subunit beta
  KO
K03530  DNA-binding protein HU-beta
Organism
hnv  Hymenobacter nivis
Brite
KEGG Orthology (KO) [BR:hnv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hnv03032]
    DDQ68_18400
   03036 Chromosome and associated proteins [BR:hnv03036]
    DDQ68_18400
   03400 DNA repair and recombination proteins [BR:hnv03400]
    DDQ68_18400
DNA replication proteins [BR:hnv03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    DDQ68_18400
Chromosome and associated proteins [BR:hnv03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    DDQ68_18400
DNA repair and recombination proteins [BR:hnv03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      DDQ68_18400
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_1 HU-CCDC81_euk_2 DUF2267 HU-CCDC81_bac_2 Hs1pro-1_C
Other DBs
NCBI-ProteinID: AWM35495
UniProt: A0A2Z3GX28
Position
4144173..4144481
AA seq 102 aa
MTKAEVIAEISQKTGIEKADVLMTVEAFFKVVKDSMTEGNNIYVRGFGSFVNKKRARKVA
RNISKNTSLIIEEHYIPSFKPSKTFVAKIKNSKKVKATAAKA
NT seq 309 nt   +upstreamnt  +downstreamnt
gtgaccaaagcagaggtaatcgccgaaatttcgcagaaaaccggcatcgagaaagcagat
gtattgatgactgtagaagccttcttcaaagtggtgaaggattcgatgaccgagggcaac
aacatctacgtgcgcggcttcggttctttcgttaacaagaagcgcgcccgtaaagtggcc
cgcaatatttcgaaaaacacgtcgctcatcattgaggagcactacatcccgagcttcaag
ccgtcgaaaaccttcgtggctaaaattaaaaatagcaagaaagtaaaagccacggctgcc
aaagcttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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