KEGG   Haliangium ochraceum: Hoch_0045
Entry
Hoch_0045         CDS       T01103                                 
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
hoh  Haliangium ochraceum
Brite
KEGG Orthology (KO) [BR:hoh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hoh03021]
    Hoch_0045
Transcription machinery [BR:hoh03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Hoch_0045
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 HTH_10 I-TevI_DNA-bd DUF5384 DUF134
Other DBs
NCBI-ProteinID: ACY12687
UniProt: D0LFQ3
Position
76248..77075
AA seq 275 aa
MDTSRRRNLVKGAIAEHWQPLFNFAFRMTLDRERAGKATEECFLRAYVGAEDLPEDAERA
ETWLLRICSHILEQQLPRQPEVSFDILDETLRSEATRTDVVRSLTDPQRDFMLWELKQGC
MTAVINCLSPGERAAFIMANILHKSDADASKALGISKSAYKVRLSRARKKVVDYLAPRCE
HVDPMNPCRCPARVGVAMHKGFIRGPGEVQLRKPVTPFGRYGAGPKNEDVPLRDVSSIYR
NLPEPESSPGFVERMQQKIDSGLWDQVLEKKQQRK
NT seq 828 nt   +upstreamnt  +downstreamnt
gtggataccagcagacgccgaaacctcgtcaagggcgcgattgcggagcattggcagccc
ttgttcaacttcgcctttcgcatgacgctcgaccgcgagcgcgcgggtaaggcgacggaa
gaatgctttttgcgcgcctacgtaggagcggaggatctgcccgaggatgccgagcgcgcc
gagacgtggctgcttcgcatctgcagtcacatcctcgagcagcagctaccgcgtcagccc
gaggtgagcttcgacattctcgacgagacgctgcgcagcgaagccacgcgcaccgacgtg
gtccgctcgctcaccgatccgcagcgcgacttcatgctctgggagctcaagcagggctgc
atgacggctgtcatcaactgcctgtcgccgggcgagcgcgcggccttcatcatggccaac
atcctgcacaagagcgacgccgacgcatccaaggcgctcggcatcagcaagagcgcctac
aaagtccggctgtcgcgtgcgcgcaagaaggtcgtcgattacctggccccgcgctgcgaa
cacgtcgatccgatgaacccatgtcgctgcccggcccgcgtcggcgtggccatgcacaag
ggcttcatccgcggccccggcgaggtgcagctacgcaagccggtcaccccctttggccgc
tacggcgccggtcccaagaacgaggacgtaccgctgcgcgatgtctcgtcgatctatcgc
aatctgcccgagcccgagagctcgcccgggttcgtcgagcgcatgcagcagaagatcgac
agcggcctgtgggaccaggtcctcgagaagaagcagcagcgcaagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (24)   

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