KEGG   Haliangium ochraceum: Hoch_3220
Entry
Hoch_3220         CDS       T01103                                 
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily
  KO
K02405  RNA polymerase sigma factor FliA
Organism
hoh  Haliangium ochraceum
Pathway
hoh02020  Two-component system
hoh02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:hoh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Hoch_3220
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    Hoch_3220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hoh03021]
    Hoch_3220
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:hoh02035]
    Hoch_3220
Transcription machinery [BR:hoh03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Hoch_3220
Bacterial motility proteins [BR:hoh02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    Hoch_3220
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2
Other DBs
NCBI-ProteinID: ACY15722
UniProt: D0LTM8
Position
4438257..4438889
AA seq 210 aa
MLSVERRCLVEQNIGLARSIAGRLQRSMSLQVDFDDLLAHAQAGLIEASLRYDFAAETPF
RMFARYRIRGAIFDWIRRMGYSRRAGRNARSPAEGEGAEDAERVRLPVPQVVFQAAYEES
GPQAARAPTESAEAALAQKLRDRFVAQALTRLPAREQQFLRQCYYEDKTRVAAGASLGLS
RYQAFRLHARAVGMLREELAAHGIRAFDDA
NT seq 633 nt   +upstreamnt  +downstreamnt
gtgttgtcggtggaacgtcgttgtttagtggaacagaatatcgggttggcgcggagcatc
gcggggaggctgcagcgcagcatgagcctgcaggtggacttcgacgacctgttggcgcac
gcgcaagccgggctcatcgaggccagcctgcgctatgatttcgcggctgagacgccgttt
cgtatgtttgcgcgatatcgaattcgcggcgccatcttcgattggatccggcgtatgggc
tattcgcgccgggccggacgcaacgcgcgctcgccggccgagggcgaaggcgccgaggat
gccgagcgggtgcggttgccggtgccgcaggtggtgtttcaggcggcgtatgaggagtcg
ggaccgcaggccgcgcgcgcgccgaccgaatccgccgaggcggcgctggcgcagaagctg
cgcgatcgcttcgtggcccaggcgctcacccgactgccggcgcgcgagcagcagttcctg
cgccagtgctactacgaggacaagaccagggtcgcggccggggcctcgctggggttgtcg
cgctaccaggcgtttcgcctgcacgcgcgcgccgtgggcatgctgcgcgaggagctggcc
gcgcacggcatccgcgcgttcgacgacgcttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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