KEGG   Halothermothrix orenii: Hore_16230
Entry
Hore_16230        CDS       T00838                                 
Name
(GenBank) excinuclease ABC, B subunit
  KO
K03702  excinuclease ABC subunit B
Organism
hor  Halothermothrix orenii
Pathway
hor03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hor00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Hore_16230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hor03400]
    Hore_16230
DNA repair and recombination proteins [BR:hor03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Hore_16230
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Hore_16230
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_22 AAA_19 DUF87 SWI2_SNF2 Kinesin HEM4 DUF1131 AAA_16 HerA_C SBDS_domain_II AAA_7 P-loop_SecA AAA_5 AAA
Other DBs
NCBI-ProteinID: ACL70372
UniProt: B8CYK3
Position
complement(1743481..1745499)
AA seq 672 aa
MKTEKKFKLVSSYSPKGDQPQAIEKLVKGVNKGYRHQTLLGATGTGKTYTMAAVIEKLNK
PTLVIAHNKTLAAQLCSEFREFFPENAVHYFVSYYDYYQPEAYVPQTDTYIEKDASINED
IDKLRLAATSSLFERRDVLIVASVSCIYGLGNPEDYLDLSCHLKVGDLKERNTILQELIF
MQYSRNDIDLSRGHFRVKGDVIDIFPAYRDEAIRVELFGDEIDRITKINTVTGEVLQEID
EITIYPASHFVTPEDKIKRALKTIQVELEERLKELKKQNRLVEAQRLEQRTRYDMEMLEQ
MGYCTGIENYSRHLEGRPPGSRPNTLLDYFPDDDFLVIIDESHMTIPQIGGMYAGDRSRK
EKLVEYGFRLPSALDNRPLNFEEFEKLVPRAIYVSATPGPYELKHSQQVVEQIIRPTGLV
DPVVIVKPTEGQIDDLMDEIQQVIEREERVLVTTLTKRMAEDLTEFLAEAGIRVRYLHSD
IDTLERSEIIRDLRLGEFDVLVGINLLREGLDLPEVSLVAILDADKEGYLRSERSLIQTI
GRAARNVNGRVVMYADKITESMEKAIDETERRRKIQLEFNKKHGITPTTIVKPVRKVLRP
EDMIIKDVDEIDYSVKSGEGEEIKNLSPSEIRHRILELEEEMKEAADNLEFELAAQIRDE
IKELEEELEKMR
NT seq 2019 nt   +upstreamnt  +downstreamnt
ttgaaaacagagaagaaatttaaactggtttcctcatattcgccaaaaggagaccagccc
caggccattgaaaaactggttaaaggggtaaataagggttacaggcatcagaccctgctg
ggggcaacagggacaggtaaaacctataccatggcagcggtaatcgaaaagctgaacaag
cctaccctggtaattgcccacaataaaacactggcggctcaactctgtagtgaattccgg
gaattttttcctgaaaatgctgttcattactttgtcagctattatgattattatcaaccg
gaagcttatgtcccccagacagatacctatattgagaaagatgcttctataaatgaggat
atagataagctacgcctggcagctaccagttctctctttgagagacgggatgtgctgatt
gtggccagtgtttcctgtatttatggcctcggtaatccagaggattacctggatctatcc
tgccaccttaaggttggggatttgaaggaaaggaatacaatcctccaggaacttattttt
atgcaatatagccgcaatgatattgatctgtcccggggtcatttccgggtaaaaggtgat
gttatcgatatttttcctgcatacagggatgaggcaataagggttgaattgttcggggat
gaaatagatcgtatcactaaaatcaatacagtgactggagaggttctacaggagattgat
gagattactatttatccagcgagccattttgttacccctgaagataaaataaagagggca
ctaaaaacaattcaggtagagctggaagaaaggttaaaggagcttaaaaaacagaatcga
ttggtagaggcccaacgccttgaacagaggacccgctacgacatggagatgctggaacag
atggggtactgtaccgggattgaaaattattcccgtcacctggaggggcgaccgcccggt
tccaggcccaacaccttacttgactatttccccgatgatgattttctggtgattatcgat
gaatcccacatgacaataccccagatcgggggcatgtatgccggagacaggtcccgtaag
gaaaaactggttgaatatggattcaggttgccgtcagccctggataacaggcccctgaac
tttgaagaatttgaaaaactcgtgccccgggcgatttatgtgtctgccaccccgggccct
tatgagttgaaacacagccagcaggtagttgagcagattataaggccgaccggtctggtt
gacccggtggttatcgttaaacctaccgaaggtcagatagatgacctgatggatgaaatt
caacaggttattgaaagggaagaaagggtcctggtaacaactttaaccaaacggatggca
gaggatttgaccgagtttctggctgaagcaggaatcagggttagatacctccattctgat
attgataccctggaacggtccgaaattataagggatttgaggctcggcgagtttgatgtt
ctggtcgggataaatttgctccgggaaggccttgatttacccgaggtatcgctggtagcc
atcctggatgctgataaggagggttatttgcgttctgaacgttccctgatacagaccatt
gggcgggctgcccgtaatgttaacgggcgggtcgttatgtatgctgataagattacagaa
tcaatggaaaaggccatagatgagaccgaaagaaggagaaaaattcagcttgaatttaat
aaaaaacatgggattacacccacgaccatcgtaaaaccggtcagaaaagtgctcaggcct
gaagatatgattattaaagatgtagatgaaatagactattctgttaagtcgggtgaaggg
gaggagattaagaacctgtctccttctgaaatacgccaccggattctggaacttgaggaa
gagatgaaagaggcggccgataacctggagtttgaactggcagcccagataagggatgaa
ataaaggaactggaagaagagctggaaaagatgaggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (75)   
   KEGG ORTHOLOGY (1)   
   RefGene (72)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (21)   
   Pfam (21)   
All databases (101)   

Download RDF
DBGET integrated database retrieval system