KEGG   Helicobacter pylori HPAG1: HPAG1_1294
Entry
HPAG1_1294        CDS       T00365                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
hpa  Helicobacter pylori HPAG1
Pathway
hpa03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hpa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    HPAG1_1294
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hpa03400]
    HPAG1_1294
Enzymes [BR:hpa01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     HPAG1_1294
DNA repair and recombination proteins [BR:hpa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     HPAG1_1294
 Prokaryotic type
     HPAG1_1294
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: ABF85361
UniProt: Q1CRR1
Position
complement(1339335..1340036)
AA seq 233 aa
MKLFDYAPLSLAWREFLQSEFKKPYFLEIEKRYLEALKSPKTIFPKSSNLFYALNLTPPS
AVKIILLGQDPYHSTYLENQQELPVAMGLSFSVEKNAPIPPSLKNIFKELHANLGVSVPC
CGDLSAWAKRGMLLLNAILSVEKNKAASHKRIGWEAFSDQILMRLFEANAPLIVVLLGKV
AQKKIALIPKNKHIIITAPHPSPLSRGFLGSGVFTSIQNAYREVYHKDFDFSL
NT seq 702 nt   +upstreamnt  +downstreamnt
atgaagctttttgactacgctcctttgagtttggcttggcgggaatttttgcaaagcgaa
tttaaaaagccttattttttagaaatagaaaaacgctacctagaggctctaaaaagccct
aaaactattttccctaaaagctctaatctgttttatgcgctcaatctaacgccccctagc
gcggttaaaatcatccttttagggcaagacccctaccattccacctacctagaaaatcag
caagaattgcctgtggcgatgggcctaagctttagcgtggaaaaaaacgcccccatcccc
ccaagcttaaaaaatatttttaaagaattgcatgcgaatttgggcgtgtctgtgccttgt
tgtggggatttgagcgcgtgggctaaaaggggcatgctgttattgaacgccattttaagc
gtggaaaaaaataaggccgcttcgcacaaacgcatcggttgggaagcttttagcgatcaa
atattgatgcgcctttttgaagccaacgcccccttgatcgtggtgttattagggaaagtc
gcccaaaaaaagatcgcgctaatccccaaaaacaaacacatcatcatcacagcccctcac
cctagccccttatctagaggttttttagggagtggggtttttacaagcatccaaaacgct
tacagagaggtttatcataaggattttgatttcagtttatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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