KEGG   Hafnia paralvei: AL518_16985
Entry
AL518_16985       CDS       T05667                                 
Symbol
tssJ
Name
(GenBank) type VI secretion system lipoprotein TssJ
  KO
K11906  type VI secretion system protein VasD
Organism
hpar  Hafnia paralvei
Pathway
hpar03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hpar00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AL518_16985 (tssJ)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hpar02044]
    AL518_16985 (tssJ)
Secretion system [BR:hpar02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   AL518_16985 (tssJ)
SSDB
Motif
Pfam: T6SS-SciN
Other DBs
NCBI-ProteinID: AMH19552
Position
complement(3782634..3783182)
AA seq 182 aa
MSIFAFKSHSFQAGAVVLSALLLAGCGLTQSVADGTVSVTKSIFYKQIKTLHLDFNAREA
LNTDANDMSALSVPTMVRVYQLRDSKAFEQLDYQSLLVDGDASLKTDLLSSREVVVKPGT
GALLNMPMEKEAKFVAVVGLFRMPDTQKNSWRLVIDREDLLPDDPRVIELGNNALSLKPV
KD
NT seq 549 nt   +upstreamnt  +downstreamnt
atgtcaattttcgcttttaaatcccattcatttcaggccggcgccgtggtgttgtcggcg
ctgctgctggctggctgtggtttaacgcagagcgttgcggatggaacggtttcagtaacc
aaatcgatattctacaagcagataaaaacccttcatctggatttcaatgcccgcgaagcg
ctaaacactgacgctaatgatatgagtgcattatcggtgcctaccatggtacgggtttat
cagttgcgtgatagcaaagcctttgaacagttggattatcaaagcttgttggttgatggt
gacgccagcctgaaaaccgatttgttgagttcgcgcgaagtcgtggtgaagccgggtacg
ggggcattgttgaatatgccaatggaaaaagaggccaaatttgtggcggtggttggcctg
tttcggatgcctgatacgcagaaaaacagctggcgcttggtgattgatcgtgaggatctg
ttgccggatgaccctcgggtaatcgagctcggtaataatgcactgagtctgaaaccggtt
aaggattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (1)   
   Pfam (1)   
All databases (7)   

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