KEGG   Glaesserella parasuis ZJ0906: K756_03275
Entry
K756_03275        CDS       T02697                                 
Name
(GenBank) exoribonuclease II
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
hpaz  Glaesserella parasuis ZJ0906
Brite
KEGG Orthology (KO) [BR:hpaz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hpaz03016]
    K756_03275
Enzymes [BR:hpaz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     K756_03275
Transfer RNA biogenesis [BR:hpaz03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    K756_03275
SSDB
Motif
Pfam: RNB OB_RNB S1 CSD2 PilZ
Other DBs
NCBI-GeneID: 16165667
NCBI-ProteinID: AGO15888
UniProt: A0A806J8P3
Position
complement(616746..618725)
AA seq 659 aa
MFQNNPLLAQLKQQIEASKEYVEGVVKTSDKSYGFLECEKNSYFIPPVEMKKVMHGDKVK
AVVKRDGDKEQVEIDSLLEPMLERFIAQVRFNKDGKLQLAVDHPSINNFIPANTQKKVTE
TLENGDWVVAQLKTHPLRDDRFFFAQVTQFICKADDNFAPWWVTLARHEQPREPVANEKS
YELQDQVEREDLTHLYFTTIDSASTKDMDDALYVEPISENGTQTGWRLVVAIADPTAYIP
EQSAIEKAARQRCFTNYLPGFNIPMLPRELSDDLCSLVPNEKRPALVGYIETDLSGNVVG
EARFVSAWVQSKARLVYDEVSDYLEKVENHWTPDYAETAQQIDWLYQFTLARIDWRSKNA
LLFKEQGDYSFELAEDGAVKAIHIEYRRIANQMIEEAMIIANICAAQFLDKYAHTGVFNT
HSGFDSKNLEPARKFLLDTLSNDENRESLSERYSPERLSTLEGYCEMRRDIEQFPENFLE
MRLRRYLTFAEFKATSAPHLGLGISHYATWTSPIRKYGDMVNHRLIKQVLANQTAKPVEE
TVLTRLQEARKQNRMVERDIADWLYARYLAPMVEQNVEFDGEIQDVSRGGLRVKVIENGA
SVFVPFSTLHNNKEEMIFSSEEIALYIKGEKAYQIGQAVKVKLKEVRVETRSVVGDVLI
NT seq 1980 nt   +upstreamnt  +downstreamnt
atgttccaaaataaccccctattagctcaattaaaacaacagattgaagcaagcaaagaa
tatgttgaaggcgttgtgaaaacgtcagataaaagttatggctttttagaatgtgagaaa
aatagctatttcattccccctgtggaaatgaaaaaagtgatgcacggcgataaggtcaaa
gctgttgtgaagcgtgatggcgataaagagcaagttgaaattgactcgttattagagcca
atgttagaacgttttatcgctcaagtgcgttttaacaaagacgggaaattgcaattagcc
gttgatcacccaagtatcaataactttattccagccaatacgcagaaaaaagtcacagaa
acccttgaaaatggcgactgggtggtggcacagttgaaaacacaccctcttcgtgatgat
cgctttttctttgctcaagtcacgcaatttatctgtaaagcggacgataatttcgcgccg
tggtgggtaactttagctcgccacgaacagcctcgtgaacctgttgcgaatgagaaaagc
tatgaattacaggatcaagttgagcgcgaagatctaactcacctctattttactaccatt
gacagtgccagcactaaagatatggacgatgcgttatacgttgaaccaattagcgagaac
ggcacgcaaacaggctggcgtttagtcgttgcgattgccgatccgaccgcttacattcct
gagcagtctgcaattgaaaaagccgctcgccaacgctgtttcaccaactatcttcctggt
tttaacattccgatgttgccacgagagctgtccgatgatctttgctctctcgtgccgaat
gaaaaacgcccagcattagtcggctatattgaaacagatttaagcggcaatgtggtaggt
gaagctcgctttgtgtcagcttgggttcaatctaaagctcgtttggtctatgacgaagtg
tctgattatctcgaaaaagtcgaaaatcactggacaccagactatgcagaaaccgcacag
caaatcgactggttgtatcaatttacccttgctcgtatcgactggcgtagcaaaaatgca
ttgctatttaaagagcaaggcgattacagctttgagttagctgaagacggcgcagtcaaa
gcaattcacattgaatatcgccgtatcgctaaccaaatgatcgaagaggcaatgattatt
gccaacatctgtgccgcacagtttttagataaatatgcacatacaggcgtatttaatacc
cactcaggttttgatagtaaaaacctagagcctgctcgcaaattcttactggatacgctt
tccaatgatgaaaatagagagagtttatctgaacgctactcccctgagcgtttaagtacc
cttgaaggctattgcgaaatgcgtcgtgatattgagcaattccctgaaaatttcttagaa
atgcggttacgtcgctatttaacttttgctgaatttaaagcaacctcagcaccacattta
ggcttaggcatcagtcattatgcaacttggacatcgccaattcgtaaatacggcgatatg
gtcaatcatcgtttaattaaacaagtccttgcaaatcaaacagcaaaacctgtcgaagaa
accgttttaactcgcttacaggaagctcgtaagcaaaatcgtatggttgaacgtgatatt
gccgactggctctatgcccgttatcttgcgccaatggtagaacaaaacgtagaatttgac
ggcgaaattcaagatgtttctcgtggtggcttgcgtgttaaagtcattgagaatggagct
tcggtttttgttccattctcaactctacataataacaaagaagaaatgatcttctcttca
gaggaaatcgctctttacatcaaaggcgaaaaagcttaccaaatcgggcaagcggtgaaa
gtgaagctcaaagaggttcgtgtagaaacaagatcggttgtgggtgacgttttaatctaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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