KEGG   Helicobacter pylori B38: HELPY_1310
Entry
HELPY_1310        CDS       T00950                                 
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
  KO
K00566  tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
Organism
hpb  Helicobacter pylori B38
Pathway
hpb04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:hpb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    HELPY_1310 (trmU)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hpb03016]
    HELPY_1310 (trmU)
Enzymes [BR:hpb01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.13  tRNA-uridine 2-sulfurtransferase
     HELPY_1310 (trmU)
Transfer RNA biogenesis [BR:hpb03016]
 Prokaryotic type
  tRNA modification factors
   Thiolation factors
    HELPY_1310 (trmU)
SSDB
Motif
Pfam: tRNA_Me_trans tRNA_Me_trans_M tRNA_Me_trans_C QueC Asn_synthase ThiI Diphthami_syn_2 Arginosuc_synth THF_DHG_CYH NAD_synthase ATP_bind_3
Other DBs
NCBI-ProteinID: CAX30019
UniProt: C7C0N8
Position
complement(1298978..1300006)
AA seq 342 aa
MKIAVLLSGGVDSSYSAYSLKEQGHELVGIYLKLHASEKKHDLYIKNAQKACEFLGIPLE
VLDFQKDFKSAVYDEFINAYEEGQTPNPCALCNPLMKFGLALDHALQLGCEKIATGHYAR
VKEIDKISYIQEALDKTKDQSYFLYALEHEVIAKLVFPLGDLLKKDIKPLALSAMPFLGT
LETYKESQEICFVEKSYIDTLKKHVEVEKEGVVKNLQGEIIGTHKGYMQYTIGKRKGFSI
KGALEPHFVVGIDAKKNELIVGKKEDLATHSLKAKNKSLMKDFKDGEYFIKARYRSVPAK
AHVSLRDEVIEVEFKEPFYGVAKGQALVVYQDDILLGGGVIV
NT seq 1029 nt   +upstreamnt  +downstreamnt
atgaaaatagcggtattactcagtgggggggtggatagctcttatagtgcttatagctta
aaagagcaagggcatgaattagtggggatttatttgaaactccatgcgagtgaaaaaaag
catgatttatacattaaaaacgctcaaaaagcgtgcgagtttttgggcattcctttagag
gtgttggattttcaaaaggattttaaaagcgcggtttatgatgaatttatcaacgcctat
gaagaggggcaaacccctaacccatgtgcgttgtgcaaccctttaatgaaatttgggcta
gctttagatcacgctttacaattagggtgtgaaaagatcgctactgggcattatgcgaga
gtcaaagaaattgacaaaataagttatattcaagaagctttggataaaactaaagatcag
agctattttttatacgctttagagcatgaagtgatcgctaaattggtgttccctttaggg
gatttgctaaaaaaggatattaagcctttagccttgagtgcgatgccttttttaggcact
ttagagacttataaggaatctcaagaaatttgctttgtggaaaaaagctacattgacact
ttaaaaaagcatgttgaagtggaaaaagagggcgtggtgaaaaacctacaaggcgaaatc
attggcacgcataagggctatatgcaatacacgattggcaaacgcaaaggctttagtatt
aaaggtgcgttagagccgcattttgtggtggggattgacgctaaaaagaacgagctaatt
gtaggtaaaaaagaagatctcgccacgcattcgcttaaggctaaaaacaaatctttaatg
aaagattttaaagatggcgaatacttcatcaaggctcgttacaggagcgtgcctgctaaa
gcgcatgtgagtttgagagacgaggtgattgaggtggagtttaaagagcctttttatggc
gtggctaaagggcaagccttggtcgtttatcaagatgacatcttgctgggtgggggcgtg
attgtttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (29)   

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