KEGG   Helicobacter pylori PeCan4: HPPC_00590
Entry
HPPC_00590        CDS       T01322                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
hpc  Helicobacter pylori PeCan4
Brite
KEGG Orthology (KO) [BR:hpc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hpc03032]
    HPPC_00590
   03400 DNA repair and recombination proteins [BR:hpc03400]
    HPPC_00590
Enzymes [BR:hpc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     HPPC_00590
DNA replication proteins [BR:hpc03032]
 Prokaryotic type
  DNA Topoisomerases
   HPPC_00590
DNA repair and recombination proteins [BR:hpc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      HPPC_00590
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim DUF1272 Lar_restr_allev Zn-ribbon_8 LysW-like_globular zf_Rg
Other DBs
NCBI-ProteinID: ADO06367
UniProt: E1Q472
Position
114883..117093
AA seq 736 aa
MKHLIIVESPAKAKTIKNFLDKNYEVIASKGHVRDLSKFALGIKIDETGFTPNYVVDKDH
KELVKQIIELSKKASTTYIATDEDREGEAIGYHVACLIGGKLESYPRIVFHEITQNAILN
ALKTPRQIDMSKVNAQQARRFLDRIVGFKLSSLISSKITKGLSAGRVQSAALKLVIDKER
EIKAFKPLTYFTLDALFESHLEAQLISYKGNKLKAQELIDEKKAHEIKSELEKESYTISS
IVKKSKKSPTPPPFMTSTLQQSASSLLGFSPTKTMSIAQKLYEGVATPQGVMGVITYMRT
DSLNIAKEALEEARNKILKDYGKDYLPPKAKVYSSKNKNAQEAHEAIRPTSIILEPNALK
DYLKPEELKLYTLIYKRFLASQMQDALFESQSVVVACEKGEFKANGRKLLFDGYYKILGN
DDKDKLLPNLKENDPIKLEKLESNAHVTEPPARYSEASLIKVLESLGIGRPSTYAPTISL
LQNRDYIKVEKKQISALESAFKVIEILEKHFEEIVDSKFSASLEEELDNIAQNKADYQQV
LKDFYYPFMDKIEAGKKNIISQKVHEKTGQPCPKCGGELVKKNSRYGEFVACNNYPKCKY
IKQTENANDGANQELCEKCGGEMVQKFSRNGAFLACNNYPECKNTKSLKNTPNTNEIIEG
VKCPECGGDIALKRSKKGSFYGCNNYPKCNFLSNHKPINKRCEKCHYLMSERMYRKKKAH
ECIKCKERVFLEEYNG
NT seq 2211 nt   +upstreamnt  +downstreamnt
atgaagcaccttattatcgtagaatcccccgcaaaagccaaaaccattaaaaattttttg
gataaaaattacgaagtcatcgcctctaaagggcatgttagggatttgtccaaattcgct
ttaggcattaagattgatgaaacaggctttacccctaattatgtcgtggataaagaccat
aaagagcttgtcaaacagatcatagagctttctaaaaaggcatctaccacctacatcgct
accgatgaagacagagaaggggaagcgataggctatcatgtggcgtgtttgattgggggg
aaattagagagctatcctaggattgtttttcatgagatcacgcaaaatgcgattttaaac
gctctaaaaaccccacgacaaattgacatgtctaaggtcaatgcccaacaagccaggcgt
tttttggatcgaatcgtaggctttaaattaagctcgttgatttcatctaaaatcactaaa
ggtttgagcgctgggcgggtgcaaagtgcggctttaaagcttgtgattgataaagaaagg
gaaatcaaagcctttaagcctttaacctacttcacgctagacgctttgtttgagtcgcat
ttagaagcgcagctcattagctataagggcaacaaactcaaagcccaagaacttattgat
gaaaaaaaagctcatgagattaaaagcgaattagaaaaagaaagctacactatctctagt
atcgttaaaaaatctaaaaaatcccccacaccacctcccttcatgacttctactttacag
caaagcgcttccagtcttttaggtttttcgcccacaaaaaccatgagtatcgctcaaaaa
ttgtatgaaggcgtagccaccccgcaaggggttatgggagtgatcacttacatgaggact
gatagcttgaatatcgctaaagaggctttagaagaagcgaggaataagattttaaaagac
tatggcaaagactacttaccccctaaagccaaagtctattccagcaagaataaaaacgcc
caagaagcccatgaagcgatcagacccacttctattattttagagccaaacgctttaaaa
gactaccttaagcctgaagaattaaagctctatactttaatttacaaacgcttcttagct
tctcaaatgcaagacgctctttttgaaagccaaagcgtggttgtggcttgcgaaaaaggc
gagtttaaagcgaatgggagaaagctcctttttgatggctattataaaattttaggcaat
gacgataaggacaaattgctccccaatttgaaagaaaatgaccccattaaattagaaaaa
ctagagagcaacgctcatgttacagagcctccagcgcgctattcagaagcgagtttgatt
aaagttttagaaagtttaggcataggcaggcccagcacctacgccccaacgatttctctt
ttacaaaatagagactacatcaaggtagaaaaaaagcaaatcagcgctttagagagcgct
tttaaggtgatagaaattttagaaaagcattttgaagaaatcgtggattctaaattcagc
gcttctttagaagaggaactggacaatatcgctcaaaataaagccgactatcagcaagtc
ttaaaggacttttactacccctttatggataaaattgaagctgggaaaaagaatatcatc
tctcaaaaagtgcatgaaaaaaccggccaaccatgccctaaatgcggtggggaattggtc
aaaaaaaatagccgttatggggagtttgtcgcttgcaacaactaccctaaatgcaaatat
atcaaacaaactgaaaacgccaatgatggtgccaatcaggaattgtgcgaaaaatgcgga
ggggaaatggtgcaaaaattcagcagaaacggggcgtttttggcttgcaacaactaccct
gaatgcaaaaacaccaaatcgttaaaaaacacccctaacacaaacgaaataatagaaggc
gtaaaatgcccagaatgcggaggggatattgccttaaaaaggagtaagaaaggctcgttt
tatggctgtaacaattaccctaaatgcaattttttatccaaccataagcccatcaacaaa
cgctgcgaaaaatgccattatttgatgagtgaaagaatgtatcgcaaaaaaaaggcgcat
gaatgcattaaatgtaaagaacgcgtgtttttagaggaatataatggctaa

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