KEGG   Helicobacter pylori 51: KHP_1110
Entry
KHP_1110          CDS       T02082                                 
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
hpd  Helicobacter pylori 51
Pathway
hpd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hpd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KHP_1110 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hpd03019]
    KHP_1110 (pnp)
   03016 Transfer RNA biogenesis [BR:hpd03016]
    KHP_1110 (pnp)
Enzymes [BR:hpd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     KHP_1110 (pnp)
Messenger RNA biogenesis [BR:hpd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     KHP_1110 (pnp)
Transfer RNA biogenesis [BR:hpd03016]
 Prokaryotic type
  tRNA degradation factors
   KHP_1110 (pnp)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C KH_1 S1 PNPase S1_2
Other DBs
NCBI-ProteinID: ACX98303
Position
complement(1233756..1235822)
AA seq 688 aa
MDFITINSSNKTEEFALKQVAKQATSSLMYRLGKTIILASVCVEREPVSEDFLPLVVQFL
EKSYAAGKIPGGFVKREGRAQDFEILTSRLIDRTLRPLFPKDYRYPTQITLMVLSHDIEN
DLQVSALNAASAALFLSHIAPIKSVSACRIARIDNEFLINPNTSLLNQSSLDLFVSGTKE
SLNMIEMRSLGQQLNALEEPLMLKALELAQKSLKETCTLYEEIFTPHQNELLFKESQGII
FNERLLDLLKNQYFDEIIKGIESSALSERENVFNEIARKISEAHSEFSLEEIELSLEKVK
KTEIRRMIIKDKIRPDKRALEEVRPILIESGLLPMAHSSILFTRGQTQSLVVGVLGTDND
AQTHESLEHKAPIKERFMFHYNFPPFCVGEASSIGATSRRELGHGNLAKRALETSIKNKE
QVIRLVSEILESNGSSSMASVCAGSLALYASGVEIYDLVAGVAMGMVSEGQDHAILSDIS
GLEDTEGDMDFKIAGNLEGITAMQMDTKMSGIPLEVLYQALLQAKKAREHILKIMHEAKE
KIVINFSHLPATEIFNVVPDKIVEIIGQGGRVIREIVEKFEVKIDLNKPSGEVKIMGNKE
RVLKTKEFILNYLHSLDQELEQYAIDEVLEAQVKRIVDFGAFLSLPKGGEGLLRRQNMDR
CQVVLKEGDSIRCRVISFNKGKIALDLA
NT seq 2067 nt   +upstreamnt  +downstreamnt
atggattttatcaccatcaattctagtaacaaaaccgaagaattcgctctcaaacaagtg
gccaaacaagccaccagctctcttatgtatcgcttaggaaaaaccatcattttagcgagc
gtgtgcgtggaaagagagcctgtgagtgaagattttctgcctttagtggtgcagttttta
gaaaaatcttatgcagccggaaagattccaggcggctttgttaaaagagaaggcagggcg
caagattttgaaatcttaacctctaggcttatagataggactttacgccctttattccct
aaagactaccgctaccccacacagatcactttaatggttttaagccatgatattgaaaat
gacttgcaagtttctgctttaaacgctgcttcagccgctctctttttatcccatatcgct
cccattaaaagcgtgagcgcttgcaggatcgctaggattgataacgaatttcttatcaac
cctaacacaagccttttgaatcaatccagtttggatctgttcgtgtccggcacaaaagag
agtttgaacatgatagaaatgcgctctttggggcaacaattaaacgctttagaagagcct
ttaatgctaaaagctttagaattggctcaaaaaagtttgaaagaaacttgcacgctttat
gaagagattttcacgccccaccaaaacgagctgcttttcaaagagagccaaggaataatt
tttaatgaaaggctgttagatctattaaaaaatcagtattttgatgaaatcatcaaaggc
attgaaagttctgctttgagcgagcgagaaaatgttttcaatgaaattgccagaaaaatc
agtgaagcccactcagaattcagtttagaagaaattgaattgtctttagaaaaagtgaaa
aaaactgagataagacgcatgatcattaaggataaaatccgcccggataagcgcgcgtta
gaggaagtgcgccctattttgatagagagcggtttgctccctatggcgcatagctccatt
ttattcactagggggcaaacgcaaagcttagtggtaggggttttaggcacggataatgac
gctcaaacccatgagagtttggagcataaggcccctattaaagagcgcttcatgtttcat
tataatttccctcctttttgcgtgggcgaagcgagctctattggcgcaacttcaaggcgc
gaattagggcatgggaatttggctaaaagagccttagaaacgagtattaaaaataaggag
caggtgatacgattggtttctgagattttagaaagcaacggttcaagctcaatggcgagt
gtgtgcgcaggctctttagccctttatgcaagtggtgtggaaatttatgatctagtcgct
ggggtggctatgggcatggtgagcgaagggcaagatcacgccattttaagcgatattagc
ggtttagaagacacagaaggcgatatggattttaagattgctgggaatttagaaggcatt
acggccatgcaaatggataccaaaatgagcggtatcccattagaggttttataccaagct
ttactccaagctaaaaaagcgcgagagcatattttaaaaatcatgcatgaagcgaaagaa
aagattgtgatcaatttttcccatttgcctgcaacggagatttttaatgtcgtgcccgat
aaaattgtagaaattatcggtcaaggggggcgtgtgatcagagagatagtagaaaagttt
gaggttaaaattgatttgaataaaccgagcggtgaagtgaaaatcatggggaataaagag
cgggttttaaagactaaggaatttattttaaactatttgcattctttggatcaagaattg
gagcaatacgctattgatgaggtgttagaagctcaagtgaagcgaatcgtggattttggg
gcgtttttaagcttgcctaaggggggcgaaggcttgttaagaaggcaaaacatggacagg
tgtcaagtggttttaaaagaaggcgatagcatcaggtgtagggtgattagtttcaataag
ggtaaaatcgctttggatttggcttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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