KEGG T01798: HPELS

Helicobacter pylori ELS37: HPELS_04215

Entry

HPELS_04215       CDS       T01798

Name

(GenBank) topoisomerase I

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

hpe Helicobacter pylori ELS37

Brite

KEGG Orthology (KO) [BR:hpe00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hpe03032]
    HPELS_04215
   03400 DNA repair and recombination proteins [BR:hpe03400]
    HPELS_04215
Enzymes [BR:hpe01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     HPELS_04215
DNA replication proteins [BR:hpe03032]
Prokaryotic type
  DNA Topoisomerases
   HPELS_04215
DNA repair and recombination proteins [BR:hpe03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      HPELS_04215

SSDB

Motif

Pfam:

Topoisom_bac Toprim DUF4364 Toprim_4 FERM_C

Other DBs

NCBI-ProteinID:

AFF20383

UniProt:

H8H566

Position

863579..865639

AA seq 686 aa
MNNSVIIIESPNKVAKIREIIGAKVFATIGHFMQLKSYDESNGFKPTFDYDQEKKKHIFE
MIEACKNKKVYIATDPDREGYAIGYMFYQKIKNVASSIYRAEFFEITPSGINKGLQNALL
FENTNKQMYQSALARRVADMLLGFTLSPYLGKALGQMKGSSAGRVQTPCLKLIVDRDREI
EKFKALPENEKVSYQIQAKINDSANREVTIKHCDEKGEEIKFNDKEEALKLFESLKDNKA
CLLKDLKNSVVETKPKKPFITSTLLEKASSMLGLSISEVQSLAQNLFEAGLITYIRTDAE
SLSVEFLDETESFYAPIYKDLYLKREYKAGKQSQAEAHEAIRITHPHTTEDLESIVYNAN
ITNQDALKLYQLIFERTIESQGKNAIYDKQDLLFKIKNEYFKCSVKGLKSAGFLAMFSKK
ELENDESNDDKDNKEKEQNAQFNLKIDDVLSLNDLVLVTIKRNAPSAYKEADFVKLLENK
GIGRPSTYASYLPTLVKREYISISQDKKHIITPTHKGKRVVEVFENAYQFIIDLTYTKQM
EEVLDEIVENKSSYVDFISNLNSKCPKIEKLERNDDEIKPSSEGQITYIENILRDLQLNL
SEEFKNYKEDNRVAKAFLDRCIKEHEFFKKNNKKASSSNNDENRPATPKQISFAEMLAKK
HNVKLPKGFKYSMKVCGDFINEYHKK

NT seq 2061 nt +upstreamnt +downstreamnt
atgaataacagcgtcatcattattgaaagtcctaataaggtagctaagattagagaaatc
ataggagctaaggtctttgctaccatagggcattttatgcaacttaaaagctatgatgaa
agtaatggctttaagccgacttttgattatgaccaagaaaagaaaaaacatatttttgag
atgatagaggcgtgtaaaaacaaaaaggtttatatcgccactgaccctgatagagagggc
tatgctataggctatatgttttatcaaaaaatcaaaaatgtagctagttctatttatagg
gcggaattttttgaaatcacaccaagtgggattaacaagggcttacaaaacgccctttta
tttgaaaacaccaataagcaaatgtatcaaagcgctttagcaagacgagttgcagatatg
ctcttaggttttacgctatccccttatttaggtaaggctttaggacaaatgaaaggtagt
agtgctgggcgagtgcaaaccccttgtttaaaacttattgtagatagagacagagagatt
gaaaaatttaaggctttacctgaaaatgagaaagtaagctatcaaattcaagctaagatt
aacgatagtgctaacagagaagtaactatcaagcattgtgatgaaaagggcgaagagatt
aaattcaatgataaagaagaggctttaaaactctttgagagcttaaaggataataaagct
tgtcttttaaaggatttaaaaaactctgttgtagagactaaacctaaaaagccctttatc
acttctacgcttttagaaaaagcaagttctatgcttggtttaagtattagcgaagtgcaa
tcactagctcaaaatctctttgaggctggactgattacttacattaggacagatgcggaa
agtttgagcgtggagtttttagatgagacagagagcttttatgcacctatttataaggac
ttgtatttaaaaagagaatacaaggctggcaagcaaagccaagcagaagcccatgaagca
attcgcatcacacacccccatactactgaagatttagaaagcatagtctataatgctaat
attactaatcaagacgctttaaaactctatcaactcatttttgaaaggactattgaaagt
caaggcaagaatgccatttatgacaagcaagatttgctctttaaaatcaaaaacgagtat
tttaaatgttctgtaaagggtttaaaaagtgctggatttttagcaatgttttctaaaaaa
gagctagaaaatgatgaaagtaatgatgataaagacaataaagaaaaagaacaaaacgca
caatttaatctaaaaattgatgatgtgttaagtctaaatgacttagttttagtcaccatt
aaaagaaatgccccaagtgcctataaagaggcagattttgtcaagcttttagaaaataaa
ggcataggcagacctagcacttatgcgagctatttgcctacgcttgtaaaaagagaatat
atcagcattagccaagataaaaaacacattattacgcctacacataagggtaaaagagtg
gtagaagtgtttgaaaatgcttatcaattcattattgatttgacctatactaaacaaatg
gaagaagtgctagatgagattgtagaaaataaaagctcttatgtggattttatcagcaat
ttaaattctaaatgccctaagattgaaaagctagaaagaaatgatgatgagataaaacct
agcagtgaaggacaaatcacttatatagaaaatattttaagagatttgcaattaaattta
agcgaagagtttaaaaactacaaagaagacaacagagtggctaaggcgtttttagaccga
tgcattaaagagcatgagttttttaagaaaaacaacaaaaaggctagtagctctaataat
gatgaaaatagacccgctacgcctaaacaaattagctttgctgagatgttggctaaaaag
cataatgtcaagctccccaaaggatttaaatatagtatgaaagtgtgtggggattttatc
aatgagtatcataagaagtag

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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