KEGG   Helicobacter pylori F30: HPF30_0065
Entry
HPF30_0065        CDS       T01895                                 
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
  KO
K00566  tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
Organism
hpf  Helicobacter pylori F30
Pathway
hpf04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:hpf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    HPF30_0065 (trmU)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hpf03016]
    HPF30_0065 (trmU)
Enzymes [BR:hpf01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.13  tRNA-uridine 2-sulfurtransferase
     HPF30_0065 (trmU)
Transfer RNA biogenesis [BR:hpf03016]
 Prokaryotic type
  tRNA modification factors
   Thiolation factors
    HPF30_0065 (trmU)
SSDB
Motif
Pfam: tRNA_Me_trans tRNA_Me_trans_M tRNA_Me_trans_C QueC Diphthami_syn_2 ThiI Asn_synthase THF_DHG_CYH Arginosuc_synth Spore_III_AA NAD_synthase ATP_bind_3
Other DBs
NCBI-ProteinID: BAJ56162
Position
67641..68669
AA seq 342 aa
MKIAVLLSGGVDSSYSAYSLKEQGHELVGIYLKLHASEKKHDLYIKNTQKACEFLGIPLE
VLDFQKDFKSAVYDEFISAYEEGQTPNPCALCNPLMKFGLALDYALKLGCEKIATGHYAR
VKEIDKVSYIQEALDKTKDQSYFLYALEHEVIAKLVFPLGDLLKKDIKPLALNAMPFLGT
LETYKESQEICFVEKSYIDTLKKHVEVEKEGVVKNLQGEIIGTHKGYMQYTIGKRKGFSV
KGALEPHFVVGIDAKKNELIVGKKEDLATHSLKAKNKSLTKDFKSGEYFIKARYRSVPAK
AFVSLRDEAIEVEFEEPFYGVAKGQALVVYKDDILLGGGVIV
NT seq 1029 nt   +upstreamnt  +downstreamnt
atgaaaatagcggtattactcagtgggggggtggatagctcttatagcgcttatagctta
aaagagcaagggcatgaattagtggggatttatttgaaactccatgcgagcgaaaaaaag
catgatttatacattaaaaacactcaaaaagcgtgcgagtttttaggcattcctttagag
gtgttggattttcaaaaggattttaaaagcgcggtttatgatgaatttatcagcgcttat
gaagaagggcaaaccccaaacccttgcgcgttgtgcaaccctttaatgaagtttgggcta
gctttagattatgctttaaaattagggtgtgaaaagatcgctaccgggcattatgcgaga
gtcaaagaaattgacaaggtaagctatattcaagaggctttggataaaactaaagatcag
agctattttttatacgctttagagcatgaagttatcgctaaattggtgttccctttaggg
gatttattaaaaaaggatattaagcctttagccttgaatgcgatgccttttttaggcact
ttagagacttataaggaatctcaagaaatctgctttgtggaaaaaagctacattgacact
ttaaaaaagcatgttgaagtggaaaaagagggcgtggtgaaaaacctgcaaggcgaaatc
attggcacgcataagggctatatgcaatacacgattggcaaacgcaaaggctttagtgtt
aaaggcgcattagagccgcattttgtggtggggattgacgctaaaaagaacgagttaatt
gtgggcaaaaaagaagatctcgccacgcattcgcttaaggctaaaaacaaatctttaacg
aaagattttaaaagtggcgaatattttatcaaggcccgttacaggagcgtgcctgctaaa
gcgtttgtgagcttgagagatgaggcgattgaagtggagtttgaagagcctttttatggc
gtggctaaagggcaagccttagtcgtttataaagatgacatcttgcttggtgggggcgtg
attgtttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (12)   
   Pfam (12)   
All databases (29)   

Download RDF
DBGET integrated database retrieval system