KEGG   Helicobacter pylori F30: HPF30_1037
Entry
HPF30_1037        CDS       T01895                                 
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
hpf  Helicobacter pylori F30
Pathway
hpf03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hpf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    HPF30_1037 (xseA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hpf03400]
    HPF30_1037 (xseA)
Enzymes [BR:hpf01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     HPF30_1037 (xseA)
DNA repair and recombination proteins [BR:hpf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     HPF30_1037 (xseA)
SSDB
Motif
Pfam: Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon DUF6645 Viral_P18 SSB
Other DBs
NCBI-ProteinID: BAJ57134
Position
complement(1105085..1106347)
AA seq 420 aa
MDVLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIRCVLFKG
NANRLKFALKEGQEVVVFGGISAYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKG
YFDKANKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINTLMQGEGCVQSV
VESVAYADSFHGTKNAFDAIVVARGGGSMEDLYSFNDEKIADALHLAKTFSMSAIGHESD
FLLSDLVADLRASTPSNAMEILLPNSDEWRQRLDGFNVKLHRSFKILLHQKKAHLEHLEA
SLKRLSFENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTSPFLQTKTERL
NALENALKLAHANLKLPQFGAFVSKNNQAIELEALKRGDKIELSDEKARASAEILSVDRV
NT seq 1263 nt   +upstreamnt  +downstreamnt
gtggatgtattgagcgtgagcgaaatcaatgcgcaaatcaaagcccttttagaagcgact
tttttgcaagttagggttcaaggggaagtgagtaatttgactatccataaggtgagcggc
catgcgtatttttcgctcaaagacagccagtcagtcatcagatgcgtgctgtttaaaggg
aacgctaacaggctcaaattcgctttaaaagaagggcaggaagtggttgtttttgggggc
attagcgcgtatgttccaaggggggattatcaaatcaattgctttgaaatagaacctaaa
gatataggttcattaaccctagctttagagcaattgaaagaaaaattacgccttaagggc
tattttgataaagccaataaattacccaaaccgcattttcctaaacgagtggcagtcatc
acttctcaaaattcagccgcttgggcggacatgaaaaagatcgcttccaaacgatggccg
atgtgtgaattggtttgcatcaatactctaatgcaaggggagggttgcgttcaaagcgtg
gtggagagcgtcgcttatgcggatagctttcatggcacaaaaaacgcttttgatgcgatt
gtggtggctaggggtggggggagcatggaggatttgtattctttcaatgatgagaaaatc
gctgatgcattgcatttggctaaaactttcagcatgtcagctattgggcatgagagcgat
tttttattgagcgatttggtagcggatttaagggcttctacgccttcaaacgcgatggag
attttactccctaacagcgatgaatggcggcaaagacttgatgggtttaatgtgaaattg
caccgctcttttaaaattttgctccaccaaaaaaaggcgcatttagagcatttagaggct
tctttaaagcgattgagttttgaaaacaagcaccatttaaacgctttaaaactagagaaa
ttaaaaatcgccctagaaaataaaaccctagaatttttacgctttaaaaaaacgctttta
gaaaaaatctctactcaaacattaacaagcccttttttacaaactaaaacagagcgattg
aacgcactagaaaacgcccttaaactcgctcatgcaaatttgaaattgccccaatttggg
gcgtttgtgagcaaaaataaccaagcgatagaattagaggcattaaaaaggggcgataaa
attgaattgagtgatgaaaaagcccgagcgagcgctgaaattttaagcgtggatagggtg
tag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system