KEGG   Helicobacter pylori F30: HPF30_1457
Entry
HPF30_1457        CDS       T01895                                 
Symbol
pbp2
Name
(GenBank) penicillin-binding protein 2
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
hpf  Helicobacter pylori F30
Pathway
hpf00550  Peptidoglycan biosynthesis
hpf01100  Metabolic pathways
hpf01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:hpf00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    HPF30_1457 (pbp2)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    HPF30_1457 (pbp2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:hpf01011]
    HPF30_1457 (pbp2)
Enzymes [BR:hpf01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     HPF30_1457 (pbp2)
Peptidoglycan biosynthesis and degradation proteins [BR:hpf01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   HPF30_1457 (pbp2)
SSDB
Motif
Pfam: Transpeptidase PBP_dimer
Other DBs
NCBI-ProteinID: BAJ57554
Position
complement(1552111..1553880)
AA seq 589 aa
MKNLRYKLLLFVFIGFWGLLVLNLFILSVKNQEYYEKLAERNMTKKEFLVPTRGNITDRN
HEFLATNELVFGVFLPSGLKQKELLEKIGIIQKFFPNFSKETLLNNYQKENSFYNHNLIK
VVGFIPYITMQPLYTKLIQTQGIFALPLDKRYYPNNALASHVLGYVGVASLQDLKDDEEN
QYSQIVGKTGVEKEYNKLLQGKVGYKIMRVNALNQELATLEVVPPSANNHLQLSLDKRLQ
KEADKLFENKRGAILVMDAENGELLVAGSYPEYNLNDFVGGISQDKWQKLQDDIYNPLLN
RFANALYPPGSVVKMGVGLSFLENLNITENTTIPTPPFIEVGKHKFRDWKKTGHGNSNLY
KAIRESVDVYFYKFGLKISIEKLSKTLREVGFGEKTGVDLPNEFVGIVPDNLWKLKRFNQ
DWRVGDTLITAIGQGSFLATPLQVLAYTGLIATGKLATPHFAINNKQPLKDPLNSFQKKK
LQALRVGMYEVCNHKDGTAYHSTRGSKVTLACKTGTAQVVEIAQNIINRMKEKDMEYFHR
SHAWITAFLPYEKPKYAITILVEHGEGGSKLGGLLVNMSNKLYELGYLN
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgaaaaatcttcgctataagcttttgctctttgtttttatagggttttgggggttattg
gttttaaatttatttattttaagcgttaaaaatcaagaatactatgaaaaactggccgaa
cgaaacatgactaaaaaggaatttctagtccctacaaggggtaatattacagacagaaac
catgagtttttagccactaatgaattagtgtttggcgtgtttttgcccagcggattgaag
caaaaagaacttttagaaaaaattggaatcatccaaaagtttttccctaacttttccaaa
gaaacgcttttaaacaattaccaaaaggaaaattcgttttataaccataacctcattaaa
gtggttggcttcattccttatattaccatgcaacctctttataccaaactcatccaaact
caaggcatttttgcactccccttagacaagcgctactaccctaataacgctttagcttcg
catgttttaggctatgtgggggtggcaagcttgcaagatctaaaagacgatgaagagaat
caatacagccagattgtgggcaaaaccggcgttgaaaaagaatacaacaagctcttacaa
ggcaaggtgggctataaaatcatgcgcgtcaatgcgctcaatcaagaattagccacctta
gaagtagtgccgccaagcgccaacaaccacttgcaattgagtttagacaaacgcttgcaa
aaagaagcggacaagctctttgaaaataaaaggggggctattttagtgatggatgcagaa
aatggggaattgctcgttgcaggaagttaccctgaatacaatttgaacgattttgtgggc
gggatcagtcaagacaaatggcaaaaacttcaagatgatatttataaccccctattaaac
cgcttcgctaacgccttgtacccgccgggatctgtggttaaaatgggcgtgggcttgagc
tttttagaaaaccttaatatcacagaaaacaccaccatacccaccccaccttttattgaa
gtgggcaagcacaaattcagagattggaaaaaaacagggcatggcaattctaatttgtat
aaagccattagggagtccgtggatgtgtatttttataagtttgggcttaaaatctctata
gaaaaactctctaaaaccttaagggaagtgggctttggggaaaaaacgggcgttgatttg
ccgaatgaatttgtggggattgtgccggataatttgtggaaactcaaacgcttcaatcaa
gattggcgtgttggggacacgctcattaccgctattgggcaaggctcttttttggccacg
cccttgcaggttctagcctacacgggactcattgctacgggcaaactggcaacgcctcat
ttcgctatcaacaacaaacaaccgctcaaagatcccctaaacagctttcaaaaaaagaag
ctccaagccttgagagtgggcatgtatgaagtgtgtaaccataaagacggcaccgcttat
cattccacaaggggttctaaggttactttagcgtgcaaaaccggcaccgcgcaagtcgtg
gaaatcgctcaaaacattatcaatcgcatgaaagaaaaggatatggaatatttccatcga
tcccatgcgtggattaccgcctttttgccttatgaaaaacccaaatacgctatcactatt
ttagtagaacatggggaaggggggtcaaaactagggggtttgttagtgaatatgagcaat
aaactctatgagcttggctatcttaactaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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