KEGG T06001: NCTC13334

Haemophilus pittmaniae: NCTC13334_00681

Entry

NCTC13334_00681   CDS       T06001

Symbol

gyrB

Name

(GenBank) DNA gyrase, subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

hpit Haemophilus pittmaniae

Brite

KEGG Orthology (KO) [BR:hpit00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hpit03032]
    NCTC13334_00681 (gyrB)
   03400 DNA repair and recombination proteins [BR:hpit03400]
    NCTC13334_00681 (gyrB)
Enzymes [BR:hpit01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     NCTC13334_00681 (gyrB)
DNA replication proteins [BR:hpit03032]
Prokaryotic type
  DNA Topoisomerases
   NCTC13334_00681 (gyrB)
DNA repair and recombination proteins [BR:hpit03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      NCTC13334_00681 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB GyrB_insert DNA_gyraseB_C HATPase_c Toprim GyrB_hook HATPase_c_3 SMC_hinge

Other DBs

NCBI-ProteinID:

SNV68477

Position

1:complement(652362..654788)

AA seq 808 aa
MSETPVTENAYGASSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAG
HCSDIIVTIHDDNSVSVQDDGRGIPVDIHPEEGVSAAQVIMTVLHAGGKFDDNSYKVSGG
LHGVGVSVVNALSDKLQLTIRRQGHVHEQIYHLGEPEAPLAVIGDTEATGTTVRFWPSSE
IFAVTTFDYKILAKRLRELSFLNSGVSIRLIDKRDGTEDHFHYEGGIQAFVEYLNKNKNP
IHPKPFYFSGEKDGIGVEVALQWNDGVNENVYCFTNNIPQRDGGTHLAGFRGALTRSLNS
YMETEGLLKKEKITTSGDDAREGLVAIVSVKVPDPKFSSQTKDKLVSSEVKGAVESAMNE
RMQEYLLENPADAKIIVNQIITAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDP
ALSELYLVEGDSAGGSAKSGRDRKTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALG
CGIGRDEYNPDKLRYHHIIIMTDADVDGAHIRTLLLTFFYRQMPELIERGYVYIAQPPLY
KVKKGKQERYIKDNDEMVQYELMLALDGASLHISADAPAMNDLAFEKLVAEYNAVQKLIH
RLSRYYPEPLLQGLVYQAPLNVELMRQESAVADWANAFVAYLGEKETNANLYSARTQFNA
ERQLYEAVITVRKHGIDTDYFLNFDFISGNEFAKIMAFGSQINGLLEAGAYVTRGEKVQP
VGSFEQAVEWLMKESRRGLEIQRYKGLGEMNAEQLWETTMDPSTRNMLKVSIKDAVAADQ
LFTTLMGDEVEPRREFIELNALRANLDI

NT seq 2427 nt +upstreamnt +downstreamnt
atgtcagagactccggttaccgaaaatgcttatggcgcatccagtattaaagttttgaaa
ggtcttgatgcggttcgtaaacgtccgggaatgtatatcggtgataccgatgatggaacg
ggtttgcaccacatggtgtttgaggtcgtagataacgctatcgacgaagcccttgccggc
cattgttccgatattatcgttacgattcatgacgacaattccgtttccgtgcaagatgac
ggtcgcggtattccggtcgatattcaccctgaagaaggcgtttcggcggcacaggttatc
atgaccgtattgcatgccggtggtaaatttgatgataactcctataaagtctccggcggt
ttacatggcgtgggtgtttccgtagtgaatgcgctatccgataaattacagctaactatt
cgccgtcaaggtcacgtgcatgaacaaatctatcacttgggtgaaccggaagcaccgctt
gcggtaattggtgacaccgaggcgaccggtactaccgtacgtttctggccaagttcagaa
atcttcgctgttaccaccttcgattataaaatccttgccaaacgcctccgggaattgtcg
ttcctaaattccggtgtatctatccgcctaatcgataaacgtgatggtaccgaggatcat
ttccactacgaggggggaattcaagccttcgtggaatatctcaacaaaaacaaaaacccg
atccatcctaaaccattctatttttccggtgaaaaagatggcattggtgtagaagttgct
ctgcaatggaatgatggtgtcaatgaaaacgtttattgctttaccaataatattccacaa
cgtgatggtggtacccacttggccggtttccgcggtgctttaacccgtagcctgaacagc
tatatggaaactgaagggttgcttaaaaaagaaaaaattaccacctctggtgatgatgcc
cgtgaaggcttggttgctatcgtttcggtaaaagtgccagatccaaaattctcgtcacaa
acaaaagataaattagtctcctccgaagtaaaaggtgcggtggaatcggcaatgaatgaa
cggatgcaggaatacctattggaaaatccggccgatgcgaaaatcatcgtgaaccaaatt
atcactgcagcccgagctcgtgaagcggcccgtaaagcgcgtgaaatgacccgccgcaaa
ggcgcattggacatcgccggcctaccgggaaaattagccgattgccaagaaaaagatcct
gcgctctccgaactttacttggtggagggtgactctgcgggcggtagtgcaaaatccgga
cgggatcgaaaaacccaagcaattttgccgttaaaagggaaaattctaaacgtagaaaaa
gcccgttttgacaaaatgttatcctcacaagaggttggcactttgatcactgcccttggt
tgcggtattggtcgtgatgaatacaacccagacaaactgcgttatcaccacatcattatc
atgaccgatgcggacgtcgatggtgcgcacatccgtaccctgttattgaccttcttctat
cgtcaaatgccggagcttatcgaacgcggttacgtctatatcgcacaaccgccattgtat
aaagtgaaaaaaggcaaacaggagcgttatatcaaagataacgatgagatggtgcaatat
gaattaatgcttgccttggacggcgcgagtttgcatatcagtgctgatgcaccggctatg
aatgatttagccttcgaaaaattggttgctgaatataatgcggtacaaaaactcattcac
cgtttaagccgttattatccagagccgttattacaaggtttagtatatcaagcgccatta
aatgttgaattaatgcgtcaggaaagtgccgtggccgactgggcaaatgcctttgtggct
tacctcggtgaaaaagaaactaacgccaatttatattccgccagaacccaattcaacgcg
gaacgtcaactttatgaagcggtgatcaccgtacgcaaacacggtatcgataccgattac
ttcctgaatttcgacttcatcagcggtaacgaattcgccaaaattatggcttttggtagc
caaatcaacggattgttagaagctggcgcctacgttacccgtggagaaaaagttcaacca
gttgggagtttcgaacaagcggttgaatggttgatgaaagaatcccgtcgtggcttggaa
atccaacgctataaagggttgggcgaaatgaatgcggagcaactttgggaaaccactatg
gatccaagtacccgtaacatgttgaaagtatcgattaaggatgccgtggccgccgatcaa
ttattcacgaccctcatgggcgatgaagtggaaccacgtcgtgaatttatcgaactcaac
gcattacgcgcgaatttagatatttaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (8)   
   Pfam (8)   
All databases (16)   

Download RDF

DBGET integrated database retrieval system