KEGG   Helicobacter pylori J99: jhp_0603
Entry
jhp_0603          CDS       T00020                                 
Symbol
gatB
Name
(GenBank) GLU-TRNA AMIDOTRANSFERASE, SUBUNIT B
  KO
K02434  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Organism
hpj  Helicobacter pylori J99
Pathway
hpj00970  Aminoacyl-tRNA biosynthesis
hpj01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:hpj00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    jhp_0603 (gatB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:hpj03029]
    jhp_0603 (gatB)
Enzymes [BR:hpj01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     jhp_0603 (gatB)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     jhp_0603 (gatB)
Mitochondrial biogenesis [BR:hpj03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    jhp_0603 (gatB)
SSDB
Motif
Pfam: GatB_N GatB_Yqey VAPB_antitox HcyBio
Other DBs
NCBI-ProteinID: AAD06184
UniProt: Q9ZLH6
Position
668277..669701
AA seq 474 aa
MPFEAVIGLEVHVQLNTKTKIFCSCSTSFGETPNSNTCPVCLGLPGALPVLNKEVVKKAI
QLGTAIEAHINQYSIFARKNYFYPDLPKAYQISQFEVPIVSDGKLEIDTKEGAKIVRIER
AHMEEDAGKNIHEGSYSLVDLNRACTPLLEIVSKPDMKNSEEAIAYLKKLHAIVRFIGIS
DANMQEGNFRCDANVSIRPKGDEKLYTRVEIKNLNSFRFIAKAIEYEIERQSVAWENGRY
NEEVVQETRLFDTAKGITLSMRNKEESADYRYFKDPDLYPVFIDEKLLKEAQKINELPGA
KKIRYMKDFNLKEDDANLLVSDPLLAEYFESMLNLGVKAKTSVTWLCVELLGRLKAEVTL
ENCGISAHALGALAKRIDEGKISGKSAKDVLDRLLEEQGGDVDTLIEQMGLSQVNDTEAI
VKVIEEVLKNNADKVLEYKSGKDKLFGFFVGQAMKNLKGANPSVVNAILKEKLD
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgccatttgaagctgtaatcgggctagaagtccatgtccaactcaacactaaaaccaaa
atcttttgctcttgctccacaagttttggagaaacccctaattctaacacctgccctgtg
tgtttgggattaccgggagctttgccggtgttgaataaagaagtggttaaaaaagccatc
caattaggcacagccattgaagcccatatcaaccagtattccatttttgcgaggaaaaat
tatttttaccctgatttgcctaaggcttatcaaatttcgcagtttgaagtccccattgtg
agcgatgggaaattagagattgacaccaaagagggcgcaaaaatcgtgcgtattgaaaga
gcccacatggaagaagacgccggtaaaaatatccatgagggcagctattctttggtggat
ttgaatcgcgcttgcacccctttattagaaattgtcagcaagccggacatgaaaaatagt
gaagaagccatagcgtatttgaaaaagctccatgctatcgtgcgttttatagggatttct
gatgcaaacatgcaagaggggaatttcaggtgcgatgcgaacgtgtccattaggcccaaa
ggcgatgaaaagctttacacgagggtagaaatcaaaaacttgaatagctttagattcatc
gctaaagcgattgaatacgagatagagcgccaaagcgtggcgtgggagaacgggcgttat
aatgaagaggtggttcaagaaacgcgcctttttgacaccgccaaagggatcaccctttct
atgcgcaataaagaagagtcagcggattaccgctactttaaagatccggatttgtatcct
gtttttattgatgagaaacttttaaaagaagctcaaaagatcaatgaattgccgggtgcg
aaaaaaatccgctacatgaaagattttaaccttaaagaagacgatgcgaatttattggtg
agcgatcctttattggcggagtattttgaaagcatgcttaatcttggggttaaggctaaa
acgagcgtaacatggctttgtgtggaattattagggcgcttgaaggctgaagttacttta
gagaattgcgggattagcgctcatgcgctaggcgctttagccaaacgcattgatgagggc
aagatttcgggtaagagtgctaaagatgtgttagataggcttttagaagaacaagggggc
gatgtggatacccttattgaacaaatgggcttgtctcaagtcaatgacacggaagcgatt
gttaaagtcatagaagaagtgttaaaaaacaacgccgacaaggtgcttgaatataaaagc
ggtaaggacaagctttttgggttttttgtagggcaagcgatgaaaaatttaaaaggggct
aatcctagcgtggtgaatgctattttgaaagagaaattggattga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

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