KEGG   Helicobacter pylori J99: jhp_0919
Entry
jhp_0919          CDS       T00020                                 
Symbol
topA_2
Name
(GenBank) topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
hpj  Helicobacter pylori J99
Brite
KEGG Orthology (KO) [BR:hpj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hpj03032]
    jhp_0919 (topA_2)
   03400 DNA repair and recombination proteins [BR:hpj03400]
    jhp_0919 (topA_2)
Enzymes [BR:hpj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     jhp_0919 (topA_2)
DNA replication proteins [BR:hpj03032]
 Prokaryotic type
  DNA Topoisomerases
   jhp_0919 (topA_2)
DNA repair and recombination proteins [BR:hpj03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      jhp_0919 (topA_2)
SSDB
Motif
Pfam: Topoisom_bac Toprim Terpene_syn_C_2 SpecificRecomb DUF2465 RP-C
Other DBs
NCBI-ProteinID: AAD06496
UniProt: Q9ZKL6
Position
1016916..1018193
AA seq 425 aa
MYKNCVFIIESPNKIAKIKELTGSSFVFATGGHFVELVNIEVNKEFNPIFEIKKSTDKKK
DRSTHINHMINQCKDKVVYIATDPDREGYGIGYKFYEKIKNLAKTIYRTEFHEITKSGVE
KGLNNAGLFSQSNLNLYYSWLGRIVSDQFIGFTLTPYLRKNIKNFEVGAGRVQTPALSIL
VELDRKIQAFEQKNNDEKLSYSIEAIIDALGSQISITLVEENKRKAFETKELAQNFLNDL
KNNLNPLAFLDAIEQKDKEKAPPKPFTTSNLLKDGARILGMGVKQIQEHAQKLFEAGLIT
YIRTDSEALSKEYLQEHEAFFEGIYPSVYEYREYRAGKNSQAEAHEAIRITHPHCYEDLK
KVCEEHNITDIDDLKVYTLIFFNTICSQSKNAIYENTVLNFKVKTHRFNAVLANSNLKVL
KRLKT
NT seq 1278 nt   +upstreamnt  +downstreamnt
atgtataaaaactgcgtatttatcatagaaagtcctaataaaatcgctaaaatcaaagaa
ttaacaggaagttcatttgtttttgcaactggtgggcattttgttgagttagtcaatatt
gaagtgaataaagaatttaaccctatttttgaaatcaaaaaaagcacagataagaaaaaa
gatagatccactcatatcaaccacatgatcaatcaatgtaaagacaaagtggtctatatt
gctactgaccctgatagagaaggttatggcataggttataaattttatgaaaaaatcaaa
aatctggctaaaacaatttatcgcacggagtttcatgaaatcacaaaaagcggtgtggaa
aaaggcttgaataatgctgggctattttctcaaagcaatctcaatctctattatagctgg
ctaggtaggattgtaagcgatcaatttataggttttactttaacgccttatttgcgcaaa
aacattaagaattttgaagtgggtgctggtagggttcaaacccctgctctttccatttta
gtagaattagacagaaaaatccaagcctttgagcaaaagaataatgatgagaaattaagt
tatagcatagaagctattattgatgcgttaggttctcaaatctctattactttagtagaa
gagaataaaaggaaagcgtttgagactaaagaattagcccaaaattttttaaatgactta
aaaaacaatcttaacccattagcttttttagacgcaatagagcaaaaagataaagaaaaa
gctccacctaagcctttcaccacttccaatcttttaaaagatggggctagaattttaggg
atgggagttaagcaaatccaagaacacgctcaaaaactttttgaagctggattgattact
tatattcgcaccgatagcgaagcgttaagtaaagaatacttgcaagaacatgaagcgttt
tttgaaggtatttatcctagcgtgtatgaatacagagaatatagggctggtaaaaattcg
caagctgaagcgcatgaggctataagaattacacaccctcactgctatgaagatcttaaa
aaagtgtgtgaggaacacaatattacagatattgatgatttaaaagtttatacgcttatc
ttttttaacaccatttgttctcaaagtaaaaacgctatttatgaaaacacagttttaaat
tttaaagtaaaaacgcacagatttaatgcagttttagccaactcaaatctaaaggtttta
aagcgattaaagacttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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