KEGG   Helicobacter pylori B8: HPB8_1225
Entry
HPB8_1225         CDS       T01262                                 
Symbol
rluD3
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
hpl  Helicobacter pylori B8
Brite
KEGG Orthology (KO) [BR:hpl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hpl03009]
    HPB8_1225 (rluD3)
Enzymes [BR:hpl01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     HPB8_1225 (rluD3)
Ribosome biogenesis [BR:hpl03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    HPB8_1225 (rluD3)
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: CBI66782
UniProt: D7FF25
Position
1200476..1201372
AA seq 298 aa
MPFVEEEFEILKPTKALFFVRDVLKCSLKEAQRHLDKQRLKQNQQAVRKSQMIQGVVSLI
HFKPNEKTQALVFETKDFGVFDKPPQVYTHPKGYFYHESLLDCIQSHFGKNAHPAHRLDY
ETSGLVLAGKTLQSAKDLKALFMQKKVKKTYLALAHGLVDKNIVIDKPILTPQNIQKDLR
IRSKISPLGKPSTTLVEPLSYNPFLDISLLKITPITGRTHQIRLHLSSVGHRIVGEGLYG
VIDENAREYLQLKRENNAPLLMLHASSLEFEFKKAFYEITSPMPKRFMPFLKDLALFY
NT seq 897 nt   +upstreamnt  +downstreamnt
gtgccttttgttgaagaagaatttgaaattttaaaacccaccaaagccttgttttttgtg
cgcgatgttttaaaatgctctttaaaagaagcccagcgccaccttgacaaacaacgccta
aaacaaaaccaacaagccgtgcgtaaatctcaaatgattcaaggggtcgttagcttgatt
catttcaagcctaatgaaaaaactcaagcacttgtttttgaaacgaaagattttggcgtg
tttgacaaaccccctcaagtctatacccaccctaaaggctatttttaccatgaaagcttg
ctggattgcatccagtcgcattttggcaaaaacgcccacccagcccacagactggattat
gaaacgagcgggttagttttagcgggcaagactttacaaagtgctaaggatttaaaagcg
cttttcatgcaaaaaaaagtgaaaaaaacttacttggcgctagcgcatgggttggttgat
aaaaatatcgtcatagacaaacccattctaacgccacaaaacattcaaaaagatttgcgt
attcggtctaaaatttctcctttaggcaagccttcaaccacgcttgttgagcctttaagc
tataacccttttttggatataagcttacttaaaattacccccataaccgggcgcacgcac
cagatccgcttgcatttgagcagcgtggggcataggatcgtgggtgaggggctttatggg
gtcatagatgaaaacgctagagaataccttcaattgaagcgcgaaaacaacgccccatta
ctcatgctccatgcctctagtttggaatttgaatttaaaaaagcgttctatgagatcacc
tcccccatgccaaaacgcttcatgccgtttctaaaagatctagcactcttttattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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