KEGG   Helicobacter pylori India7: HPIN_02715
Entry
HPIN_02715        CDS       T01918                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
hpn  Helicobacter pylori India7
Pathway
hpn03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:hpn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    HPIN_02715
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hpn03021]
    HPIN_02715
   03400 DNA repair and recombination proteins [BR:hpn03400]
    HPIN_02715
Enzymes [BR:hpn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     HPIN_02715
Transcription machinery [BR:hpn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     HPIN_02715
DNA repair and recombination proteins [BR:hpn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      HPIN_02715
SSDB
Motif
Pfam: RNA_pol_Rpb6 DUF2533
Other DBs
NCBI-ProteinID: ADU79793
UniProt: E8QFN1
Position
540676..540900
AA seq 74 aa
MKKERTESLVAQALKNIGNDRYMLDNLVFARVKQLNAGAKTLVNMDPKRHKLVDIAIREI
AEGKIDIDRIDERN
NT seq 225 nt   +upstreamnt  +downstreamnt
ttgaaaaaagagagaacagagagtttagtcgctcaagccttaaaaaatatcgggaacgac
cgctacatgctagataatttggttttcgctcgtgtgaagcaattaaacgccggagccaaa
actttagtgaatatggaccctaaacgccataaattagtggatattgccatcagagaaatc
gctgaagggaaaattgatatagacaggatagatgaacgaaattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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