KEGG T01918: HPIN

Helicobacter pylori India7: HPIN_03135

Entry

HPIN_03135        CDS       T01918

Name

(GenBank) DNA gyrase subunit A

K02469

DNA gyrase subunit A [EC:5.6.2.2]

Organism

hpn Helicobacter pylori India7

Brite

KEGG Orthology (KO) [BR:hpn00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hpn03032]
    HPIN_03135
   03400 DNA repair and recombination proteins [BR:hpn03400]
    HPIN_03135
Enzymes [BR:hpn01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     HPIN_03135
DNA replication proteins [BR:hpn03032]
Prokaryotic type
  DNA Topoisomerases
   HPIN_03135
DNA repair and recombination proteins [BR:hpn03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      HPIN_03135

SSDB

Motif

Pfam:

DNA_topoisoIV DNA_gyraseA_C Retrotran_gag_2

Other DBs

NCBI-ProteinID:

ADU79863

UniProt:

E8QFV1

Position

complement(616364..618844)

AA seq 826 aa
MQNNSVNETKNIVEVGIDSSIEESYLAYSMSVIIGRALPDARDGLKPVHRRILYAMHELG
LTSKVAYKKSARIVGDVIGKYHPHGDNAVYDALVRMAQDFSMRLELVDGQGNFGSIDGDN
AAAMRYTEARMTKASEEILRDIDKDTIDFVPNYDDTLKEPDILPSRLPNLLVNGANGIAV
GMATSIPPHRIDEIIDALIHVLENPNAELDEILEFVKGPDFPTGGIIYGKAGIIEAYKTG
RGRVKVRAKVHVEKTKNKEIIVLDEMPFQTNKAKLVEQISDLAREKQIEGISEVRDESDR
EGIRVVIELKRDAMSEIVLNHLYKLTTMETTFSIILLAIYNKEPKIFTLLELLCLFLNHR
KTIIIRRTIFELEKAKARAHILEGYLIALDNIDEIVQLIKTSQSPEAAKNALMERFTLSE
IQSKAILEMRLQRLTGLERDKIKEEYQNLLELISDLNGILKSEDRLNGVVKTELLEVKEQ
FSSPRRTEIQESYENIDIEDLIANEPMVVSMSYKGYVKRVDLKAYEKQNRGGKGKLSGST
YEDDFIENFFVANTHDILLFITNKGQLYHLKVYKIPEASRIAMGKAVVNLISLAPDEKIM
ATLSTKDFSDERSLAFFTKNGVVKRTNLSEFESNRSCGIRAIVLDEGDELVSAKVVDKNA
KHLLIASHLGIFIKFPLEDVREIGRTTRGVIGIRLNENDFVVGAVVISDDGNKLLSVSEN
GLGKQTLAEAYREQSRGGKGVIGMKLTQKTGNLVGVISVDDENLDLMILTASAKMIRVSI
KDIRETGRNASGVKLINTADKVMYVNSCPKEEEPEKLENPPTQLFE

NT seq 2481 nt +upstreamnt +downstreamnt
atgcaaaataattcagtcaatgaaacaaaaaatattgtagaagtggggattgattcttct
attgaagagagctatctagcctattccatgagcgtgatcatagggcgcgctttaccggac
gctagagatggcttaaagcctgtgcataggcgtattttgtatgcgatgcatgaattaggt
cttacttccaaagtcgcttataaaaaaagcgctaggatcgtgggtgatgtgattggtaaa
taccacccccatggcgataacgcggtttatgatgcactagtgagaatggcgcaagatttt
tccatgcgtttggaattagtggatgggcagggcaactttggctctattgatggcgataac
gctgcggcgatgcgttacactgaagccagaatgactaaggcgagtgaagaaattttaagg
gatattgataaagacaccattgattttgtgcctaattatgatgacaccttaaaagagcca
gatattttaccaagccgtctgcctaaccttttagtcaatggggctaatgggatcgccgta
ggaatggcgacttctatcccccctcacagaattgatgaaatcatagacgctttaattcat
gtcttagaaaaccctaacgctgaattagatgaaattttggaatttgtcaaagggcctgac
tttcccaccggtgggatcatttatggtaaagcagggattattgaagcctataaaacgggg
cgagggcgcgtgaaagtgcgggccaaagtgcatgtggaaaagacgaaaaataaagaaatc
atcgttttagatgaaatgcctttccaaaccaataaagccaaattagtggaacaaatcagc
gatttagcgcgagaaaaacaaattgaaggcattagcgaagtgcgcgatgagagcgataga
gagggcattagagtggtgattgaattaaaaagagacgcgatgagtgaaattgtcttaaac
cacctctacaaactcaccaccatggagaccacttttagcatcattctactcgctatttat
aataaagagcctaagattttcacgcttttagagttgttgtgccttttcttaaaccacaga
aaaaccattattataagacgcacgatttttgaattggaaaaggctaaggctagagcgcat
attttagagggctatttgatcgcactagacaatattgatgaaatcgtgcagctcattaaa
acaagccaaagtccagaagcggctaaaaacgccttaatggagcgtttcactttgagcgaa
atccaaagcaaagccattttagaaatgcgtttgcaacgcttaacaggccttgaaagagat
aaaatcaaagaagaataccaaaacttgttagagcttattagtgatctcaatggtatttta
aagagcgaagatcgcttgaatggagtcgtcaaaacagaacttttagaagtcaaagagcaa
ttttcttctccaaggcgcactgaaattcaagaatcttatgaaaatattgacatagaagat
ttgatcgctaatgagcctatggtggtgagcatgagctataaaggctatgtgaaaagagtg
gatttaaaagcttatgaaaagcaaaatcgtggcggtaagggcaagctttcaggaagcact
tatgaagacgatttcattgaaaacttttttgtggctaacacgcatgatattttgctcttt
atcaccaataaagggcaattgtatcatctgaaagtctataaaatcccagaagcgagccgg
atcgctatgggtaaagccgttgtgaatttaatctcgctcgctcctgatgaaaagatcatg
gcgaccctaagcaccaaagactttagcgatgaacgctctttagctttcttcacgaaaaat
ggcgtggtgaagcgcaccaatttgagcgaatttgaaagcaacaggagttgtggtatcaga
gcgattgttttagatgaaggcgatgaattagtgagcgcaaaagttgtggataaaaacgct
aagcatttgctcatcgcatcgcatttgggtatttttattaaattccctttagaagatgtg
cgtgagatcggaagaactactcgtggggttatagggattaggctgaatgaaaacgatttt
gttgtcggcgcggtcgttattagcgatgatggcaacaagcttttgagcgtgagtgaaaac
gggcttggcaagcaaactttagccgaagcgtatagagaacaatctcgtggaggtaagggg
gtcattggcatgaaactcactcaaaaaaccggcaatctagtgggtgttatcagcgtggat
gatgaaaatttggatttgatgatccttactgcaagcgcgaaaatgatcagagtttctatt
aaagatattagagaaaccggaagaaacgctagtggggtaaagctcataaacaccgccgat
aaagtcatgtatgtcaattcttgccctaaagaagaagagccagaaaagttagaaaaccct
cctacacaattatttgagtga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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