KEGG   Helicobacter pylori India7: HPIN_07815
Entry
HPIN_07815        CDS       T01918                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
hpn  Helicobacter pylori India7
Pathway
hpn03030  DNA replication
hpn03430  Mismatch repair
hpn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hpn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HPIN_07815 (dnaE)
   03430 Mismatch repair
    HPIN_07815 (dnaE)
   03440 Homologous recombination
    HPIN_07815 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hpn03032]
    HPIN_07815 (dnaE)
   03400 DNA repair and recombination proteins [BR:hpn03400]
    HPIN_07815 (dnaE)
Enzymes [BR:hpn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HPIN_07815 (dnaE)
DNA replication proteins [BR:hpn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HPIN_07815 (dnaE)
DNA repair and recombination proteins [BR:hpn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HPIN_07815 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon
Other DBs
NCBI-ProteinID: ADU80747
UniProt: E8QEH0
Position
1573550..1577185
AA seq 1211 aa
MKENKAFTHLHLHTEYSLLDGANKIKILAKRIKELGMKSVSVTDHGNMFGAIDFYTSMKK
EGIKPIIGMEAYIHNDDNLSSKETKQRFHLCLFAKNQEGYENLMFLSSMAYLEGFYYFPR
INKKLLREHSKGIIASSACLQGEVNYHLNTNNERNRKYGAKGYDEAKKIACEYQEIFEDD
FYLEIMRHGILDQRFIDEQVIKMSLETGLKIIATNDTHYTMPNDAKAQEVAMCVAMGKTL
NDKGRLKHSVHEFYIKSPEEMAKLFADIPEALENTQEIADKCVLEIDLKDDKKNPPTPPS
FKFTKAYAQNERLDFEDDASYFAYKAREGLKERLILVPKEKHDQYKERLEKEIEVITNMK
FPGYMLIVWDFIRYAKEMGIPVGPGRGSAAGSLVAFALKITDIDPLKYDLLFERFLNPER
VSMPDIDTDFCQRRRKEIIEYMIEKYGKYNVAQVITFNKMLAKGVIRDVARVLDMPYKEA
DDFAKLIPNRLGITLKGYEKNGEFIEGAWELEPKIKELVESNELAKQVWEYSLNLENLNR
NAGVHAAALVVDSQKELWHKTPLFASEKTGGIVTQYSMKYLEPVDLIKFDFLGLKTLTVI
DDALKIIKTQHNIDVDFLSLDMDDPKVYKTIQSGDTVGIFQIESGMFQGLNKRLRPSSFE
DIIAIIALGRPGPMESGMVDDFVNRKHGIEPIAYAFKELEPILKPTYGTIVYQEQVMQIV
QTIGGFSLGEADLIRRAMGKKDAQIMADNKAKFVEGAKNLGHDGQKAANLWDLIVKFAGY
GFNKSHSAAYAMITFQTAYLKTYYKHEFMAAMLTSESNKIESVARYIDEVRALEIEVMPP
HINSSMQDFSVAEFKNQKGELEKKIVFGLGAVKGVGGEPIKNIIEERAKGDYKSLEDFIS
RVDFSKLTKKSLEPLVKSGSLDNLGYTRKTMLANLDLICDAGRAKDKANEMMQGGNSLFG
AMEGGTKEQVILDMTDLGEHDAKTLLECEYETLGIHVSGNPLDEFKEEIKGFKNLVKSID
IEELEIGSQAYLLGKIMEVKKKIGKRSGKPYGTADILDRYGKFELMLFEKQLNALEELDI
NKPLVFKCKIEEQEEVARLRLFEILDLESAREVKIPKARYKDPEKQKEDVREIPPIEMLA
SSSCSLAIVLENDVKKEFLRQIKESALKHQGKRPLYLIIKDKDKQFKIQSDLMVNEKIKD
DFKELEWRDLA
NT seq 3636 nt   +upstreamnt  +downstreamnt
atgaaagagaataaagccttcacgcatttgcacttgcacacggaatattcgcttttagac
ggggcgaacaagattaaaattctggccaaacgcattaaagaattgggcatgaaaagcgtg
agcgtaaccgaccatggaaacatgtttggagcgattgatttttatacgagcatgaaaaaa
gaaggcattaagcctatcatcggcatggaagcgtatatccataatgacgacaacctttct
agcaaagaaaccaaacagcgtttccatttgtgcctgttcgctaaaaaccaagagggctat
gaaaatttgatgttcttaagctctatggcgtatttagaagggttttattatttcccgcgc
atcaataaaaaacttctaagggagcattctaaaggcattatcgcttctagcgcgtgcttg
caaggggaagtcaattaccatttgaataccaataatgagagaaaccgcaagtatggggct
aaaggctatgatgaagccaaaaaaatcgcttgcgaataccaggagatttttgaagacgac
ttttatttagagatcatgcgccatggcattttagatcagcgattcattgatgagcaagtc
attaaaatgtctttagaaacggggctaaaaatcattgccaccaatgacacccattacacc
atgcctaatgacgctaaggctcaagaagtggcgatgtgcgtagcgatgggtaaaacccta
aacgataaggggcgcttgaaacactccgtgcatgagttttacattaagtcccctgaagaa
atggcaaagctctttgcagacattccagaagctttagaaaacacccaagaaatcgctgat
aaatgcgttttagagatcgatttaaaagacgataaaaagaaccccccaacccccccaagc
ttcaaattcactaaagcttacgctcaaaatgagagactggattttgaagatgacgcttct
tatttcgcctataaggctagagagggcttgaaagagcgcttaattttagtgccaaaagaa
aagcatgatcaatacaaagaacgcttagaaaaagaaattgaagtcattacgaacatgaaa
ttcccggggtatatgctgattgtgtgggattttatccgttacgctaaagaaatgggcatt
cctgtagggcctggcagggggagcgcagccgggagtttggtggcttttgccttaaaaatc
acggatattgaccctttgaaatacgatttgctctttgaaaggtttttaaaccctgaaaga
gtcagcatgcctgatattgatacggatttttgccagcgccggcgtaaggaaatcatagaa
tacatgattgaaaaatacggcaaatacaatgtggctcaggtcatcacctttaataagatg
ttggctaaaggcgtgatcagagatgtcgcaagggttttggacatgccttataaagaagcc
gatgattttgccaaactcatacccaaccgcttaggcatcacgcttaagggctatgaaaaa
aatggcgagttcatcgagggggcgtgggaattagagcctaaaatcaaggaattagtagag
agtaatgaattagccaaacaagtgtgggagtattcgctcaatttagagaatttaaaccgc
aacgcaggcgtgcatgccgcagccttagtggtggatagccaaaaagagttgtggcacaaa
acccctttgtttgcctctgaaaagaccggcggtatcgttacgcaatattccatgaaatat
ttagagccggtggatttgatcaagtttgacttcttggggcttaaaaccttgaccgtgatt
gatgatgcgcttaaaatcattaaaacgcaacataacattgatgtggattttttatcgttg
gatatggacgatccaaaagtgtataaaacgatccaaagcggggatacggtggggatcttc
cagattgaatccgggatgtttcaagggcttaacaaacgcttaaggccttcaagctttgaa
gacattatcgctattatcgcgctagggagaccgggacctatggaatcaggcatggtagat
gattttgtgaacagaaagcatggcattgagcctatcgcttatgcgtttaaagaattagag
ccgattttaaagcccacttacggcacgatcgtctatcaagagcaagtgatgcaaatcgtg
caaacgattggcggttttagtttgggtgaagcggatctcatccgccgtgctatggggaaa
aaagacgctcaaatcatggcggacaataaggctaagtttgtagaaggcgctaaaaattta
gggcatgatggccaaaaggcggctaatttgtgggatttgatcgttaaatttgccggctat
ggtttcaacaaatcgcattcagccgcttatgcgatgatcactttccaaacggcgtattta
aagacttattacaagcatgagttcatggcggcgatgctcactagcgaatccaataagatt
gaatccgtggcgcgctatattgatgaggtcagggctttagaaattgaagtgatgcctccg
cacatcaattcttctatgcaagatttcagcgtggcggagtttaaaaaccaaaagggcgag
ctagaaaagaaaatcgtgtttggtttaggagcggttaaaggggttggtggtgagccgatt
aaaaacatcattgaagaaagggctaaaggggattataagagtttagaagattttatttca
cgggtggatttttctaaactcactaaaaaatctttagagccattagtgaaatcagggagc
ttggacaatttaggctacacccgaaaaaccatgctcgctaacttggatttgatctgtgat
gctgggcgcgctaaagacaaggctaatgaaatgatgcaagggggtaactccctttttggg
gcaatggaaggcgggacaaaagagcaggttattttggacatgactgatttgggcgaacat
gacgctaaaacgcttttagaatgcgaatacgagactttaggcatccatgtttcaggcaat
cccttagacgagtttaaagaagaaattaagggctttaaaaatttagtcaaaagcattgat
attgaagaattagaaatcggctcgcaagcgtatttgctaggtaaaatcatggaagttaaa
aagaaaattggcaaacgaagcggtaagccttatggcacagcggacattttggacagatac
ggcaagtttgaactcatgctgtttgaaaagcaattgaacgctttagaagagttggatatt
aataagcctctagtgtttaagtgcaagattgaagagcaagaagaagtggcacggttaagg
ctttttgaaatcttggatctagagagcgctagggaggttaaaatccctaaagcccgttat
aaagaccctgaaaagcaaaaagaagatgtgcgtgaaatcccccctattgaaatgctcgcc
tccagctcttgctctttagcgatcgtgttagaaaacgatgtgaaaaaagagtttttaaga
caaatcaaagagagcgctctaaaacaccagggcaaacgccccttgtatttgatcatcaaa
gataaggataagcaattcaaaatccaaagcgatctaatggtgaatgaaaagattaaggac
gattttaaagaattagagtggagggatttagcttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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