KEGG   Helicobacter pylori P12: HPP12_0454
Entry
HPP12_0454        CDS       T00786                                 
Symbol
virD4-1
Name
(GenBank) VirD4 coupling protein
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
hpp  Helicobacter pylori P12
Pathway
hpp03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hpp00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HPP12_0454 (virD4-1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hpp02044]
    HPP12_0454 (virD4-1)
Enzymes [BR:hpp01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     HPP12_0454 (virD4-1)
Secretion system [BR:hpp02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   HPP12_0454 (virD4-1)
SSDB
Motif
Pfam: T4SS-DNA_transf TrwB_AAD_bind TraG-D_C DEAD
Other DBs
NCBI-ProteinID: ACJ07610
UniProt: B6JL32
Position
complement(476105..477832)
AA seq 575 aa
MREKFKTLRDKFKDKTSNLFHKLNSIQKDYYTKTLPKACKDVFTLGSSKSYPMTLNFNKG
FCVGLYKGLNSLKPTYYDAPLSTLIIAPPGSGKTAAVAVPNLLSVPSSCVVLDIKGELFD
LTAGYRQQVLKNKIFVFDPLGNDNTLKFNPFDKRIVEKLDFNRKRRLVDEVGNTIFAEDG
ANKDPHWTQQAKNLFVFYALYDLCVHNTSTFFEIASAPIKNYVPLINPQSRFYTELYECQ
SSDNGFVKENGRYMAKVENGVKKMKPNANVELLWYKQVAEQVYTDPENPKNYDGSVNHLE
KDDQGNVIMKEGMLDPIIRNEANKWAKANDKEFASIKSVYSRFMQVFTSYQVKSATDSMS
FEYEDLRADNISLYIKIAQTDIDTLAPLIRILLESIAKNLLLKESKKFEERVYLFLDEFV
RFGKLPFLLEMPALSRSYGVVLIFITQPNALIEKYYGREDARIVNSTVAYKIIFKMDDLE
YAKQVSEEVGKMTRKTRSHSTEKGQLITGGTSSIGKEAWDLLSAQDIMNIDKDEVIVLVS
GHKAKPLKLKANYYFKNKELLSRINWEVKPNEEVF
NT seq 1728 nt   +upstreamnt  +downstreamnt
atgagagaaaaattcaaaacattaagagataaatttaaggataaaaccagcaatttattc
cataagcttaatagcattcaaaaagattattacactaaaactctccctaaggcttgcaaa
gatgtctttacgctaggttcttctaagagttatcctatgaccttaaattttaacaaaggt
ttttgtgtggggctgtataaaggtttaaattcgcttaagcctacttattatgatgctccg
ctttctactttaattatcgctcctcctggaagtggtaaaaccgcagctgtggctgtgcct
aatcttttaagtgtgcctagctcttgtgtggtgttagatattaaaggggagttgtttgat
ttaacggctggttacagacaacaagttctaaaaaataaaatttttgtatttgatccttta
ggaaatgataacacgcttaaattcaatccgtttgataaacgcattgtagaaaaattagat
tttaacagaaagcgaaggcttgtagatgaagtgggtaatactatttttgctgaagatggg
gcaaataaagaccctcattggacacagcaagctaaaaatttatttgtcttttacgctctt
tatgatttgtgtgtgcataacactagcaccttttttgaaattgcaagcgctcctataaaa
aattatgtccccttaatcaatccacaaagccgattttatactgaattatatgaatgccaa
agtagcgataatggttttgttaaagagaatgggcgttatatggctaaagtagaaaatggc
gttaaaaaaatgaaacctaatgccaatgtggaattgctatggtataaacaagtagccgaa
caagtctatactgacccagaaaatcctaaaaattatgatggatctgtgaatcatttagaa
aaagacgatcaaggcaatgttataatgaaagagggtatgttagatcctattattagaaac
gaagcgaacaaatgggctaaggcgaatgataaagagtttgcgagcattaaatcagtttat
agccgttttatgcaagtctttacaagctatcaagttaaaagcgctacagatagcatgagt
tttgaatacgaggatttaagggctgacaatatttcactctatattaaaatcgctcaaaca
gatattgacacactcgcaccgcttatccgtatccttttggaaagtattgctaaaaatctt
ttattgaaagagagtaagaaatttgaagaaagggtttatctctttttagatgaatttgtg
cgttttggtaaattgccttttttattagaaatgccagcattaagtaggagctatggtgtg
gttttaatttttatcacgcaacccaacgctcttattgaaaaatattatggcagagaagat
gcaagaattgttaatagcaccgtggcttacaaaataattttcaaaatggatgatttagaa
tatgctaaacaagtgagcgaagaagtcggtaagatgactagaaaaacacgaagccactct
acagaaaaaggacaactcattaccggagggacttctagcataggtaaagaggcgtgggac
ttattgagcgcgcaagatattatgaatattgataaagatgaagtgatcgttttagtaagc
ggtcataaggctaaacccttaaaattaaaagcgaattattatttcaaaaacaaagaatta
ctctctcgtattaactgggaagtcaagcccaatgaagaagtgttttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system