KEGG T01913: hp2017

Helicobacter pylori 2017: hp2017_09641

Entry

hp2017_09641      CDS       T01913

Symbol

topA2a

Name

(GenBank) DNA topoisomerase I

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

hpq Helicobacter pylori 2017

Brite

KEGG Orthology (KO) [BR:hpq00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hpq03032]
    hp2017_09641 (topA2a)
   03400 DNA repair and recombination proteins [BR:hpq03400]
    hp2017_09641 (topA2a)
Enzymes [BR:hpq01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     hp2017_09641 (topA2a)
DNA replication proteins [BR:hpq03032]
Prokaryotic type
  DNA Topoisomerases
   hp2017_09641 (topA2a)
DNA repair and recombination proteins [BR:hpq03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      hp2017_09641 (topA2a)

SSDB

Motif

Pfam:

Topoisom_bac Toprim SpecificRecomb

Other DBs

NCBI-ProteinID:

ADZ50070

Position

980578..982005

AA seq 475 aa
MYKNCVFIIESPNKITKIKELTGSSFVFATGGHFVELVNIEVSKEFNPIFEIKKSTDKKK
DRSTHINHMINQCKDKVVYIATDPDREGYGIGYKFYEKIKNIAKTIYRTEFHEITKSGVE
KGLNNAVLFSQSNLNLYYSWLGRIVSDQFIGFTLTPYLRKNIKNFEVSAGRVQTPALSIL
VELDKKIQAFEQKSIDEKLSYSIEAIIDALGSQISITLVEEDKRKVFETKELAQNFLNDL
KNNLNPLAFLDSIEQKDKEKAPPKPFTTSNLLKDGVRILEMGVKQIQEHAQKLFEAGLIT
YIRTDSESLSKEYLQEHEAFFENIYPSVYEYREYNAGKNSQAEAHEAIRITHPHCYEDLK
KVCEEHNITDTDDLKVYTLIFFNTICSQSKNAIYENTTLNFKVKTHSFKCSFSQLKSKGF
KAIKDLEEEKKDEEWVESDIDFSSLQLKTQMPILDFNIKEIKAKSPSPYTALLLQ

NT seq 1428 nt +upstreamnt +downstreamnt
atgtataaaaactgcgtatttatcatagaaagtcccaataaaatcactaaaatcaaagaa
ttaacaggaagttcatttgtttttgcaactggtgggcattttgttgagttagtcaatatc
gaagtgagtaaagaatttaaccctatttttgaaatcaaaaaaagcacagataagaaaaaa
gatagatccactcatatcaaccacatgatcaatcaatgtaaagacaaagtggtctatatt
gctactgaccctgatagagaaggttatggcataggttataaattttatgaaaaaatcaaa
aatatagctaaaacaatttatcgcacggagtttcatgaaatcacaaaaagcggtgtggaa
aaaggcttgaataatgctgtgctattttctcaaagcaatctcaatctctattatagctgg
ctaggtaggattgtaagcgatcaatttataggttttactttaacgccttatttgcgcaaa
aatattaagaattttgaagtgagtgctggcagagttcaaacccctgctctttccattcta
gtagaattagacaaaaaaatccaagcctttgaacaaaaaagcattgatgagaaattaagt
tatagcatagaagctattattgatgcgctaggttctcaaatctctattactttagtagaa
gaggataaaaggaaagtgtttgagactaaagaattagcccaaaattttttaaatgactta
aaaaacaatcttaacccattagcttttttagactcaatagagcaaaaagataaagaaaaa
gctccacctaaacctttcaccacttctaatcttttaaaagatggggttagaattttagaa
atgggcgttaagcaaatccaagaacacgcccaaaaactttttgaagctggattgattact
tatattcgcaccgatagcgaatcattaagcaaagaatacttgcaagaacatgaagcgttt
tttgaaaatatttatcctagcgtgtatgaatacagagaatataatgctggtaaaaattcg
caagctgaagcgcatgaggctataagaattacacaccctcactgctatgaagatcttaaa
aaagtgtgtgaggaacacaatattacagatactgatgatttaaaagtttatacgcttatc
ttttttaacaccatttgttctcaaagtaaaaacgctatttatgaaaacacaactttaaac
tttaaggtaaaaacgcacagctttaaatgcagttttagccaactcaaatctaaaggtttt
aaagcgattaaagacttagaagaagaaaagaaagatgaagaatgggttgaaagcgatatt
gatttttcaagcttgcaattaaaaactcaaatgcctattttagatttcaatatcaaagaa
ataaaagctaaatcccctagcccttatactgcacttttattgcaatga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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