KEGG   Helicobacter pylori Shi470: HPSH_06905
Entry
HPSH_06905        CDS       T00742                                 
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
  KO
K00566  tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
Organism
hps  Helicobacter pylori Shi470
Pathway
hps04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:hps00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    HPSH_06905 (trmU)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hps03016]
    HPSH_06905 (trmU)
Enzymes [BR:hps01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.13  tRNA-uridine 2-sulfurtransferase
     HPSH_06905 (trmU)
Transfer RNA biogenesis [BR:hps03016]
 Prokaryotic type
  tRNA modification factors
   Thiolation factors
    HPSH_06905 (trmU)
SSDB
Motif
Pfam: tRNA_Me_trans tRNA_Me_trans_M tRNA_Me_trans_C QueC Asn_synthase ThiI Diphthami_syn_2 THF_DHG_CYH Arginosuc_synth NAD_synthase ATP_bind_3
Other DBs
NCBI-ProteinID: ACD48781
UniProt: B2UV99
Position
complement(1342447..1343475)
AA seq 342 aa
MKIAVLLSGGVDSSYSAYSLKEQGHELVGIYLKLHASEKKHDLYIKNAQKACEFLGIPLE
VLDFQKDFKSAVYDEFISAYEEGQTPNPCALCNPLMKFGLALDHALKLGCEKIATGHYAR
VKEIDKVSYIQEALDKTKDQSYFLYALEHEVIAKLVFPLGDLLKKDIKPLALNAMPFLGT
LETYKESQEICFVEKSYIDTLKKHVEVEKEGVVKNLQGEIIGTHKGYMQYTIGKRKGFSV
KGALEPHFVVGIDAKKNELIVGKKEDLATHSLKAKNKSLTKDFKNGEYSIKARYRSVPTK
AFVSLRDEAIEVEFEEPFYGVAKGQALVVYKDDILLGGGVIV
NT seq 1029 nt   +upstreamnt  +downstreamnt
atgaaaatagcggtattactcagtgggggggtggatagctcttatagcgcttatagctta
aaagagcaagggcatgaattagtggggatttatttaaaactccatgcgagcgaaaaaaag
catgatttatacattaaaaacgctcaaaaagcgtgcgagtttttaggcattcctttagag
gtgttggattttcaaaaggattttaaaagcgcggtttatgatgaatttatcagcgcttat
gaagaagggcaaacccccaacccatgcgcgttgtgcaaccctttaatgaagtttgggcta
gctttagatcacgctttaaaattagggtgtgaaaagatcgctaccgggcattatgcgaga
gtcaaagaaattgacaaggtaagttatattcaagaggctttggataaaactaaagatcag
agctattttttatacgctttagagcatgaagttatcgctaaattggtgttccctttaggg
gatttgttaaaaaaggatattaagcctttagccttgaatgcgatgccttttttaggcact
ttagaaacttataaggaatctcaagaaatctgctttgtggaaaaaagctacattgacact
ttaaaaaagcatgttgaagtggaaaaagagggcgtggtgaaaaacctacaaggcgaaatc
attggcacgcataagggctatatgcaatacacgattggcaaacgcaaaggctttagtgtt
aaaggcgcgttagagccgcattttgtagtggggattgacgctaaaaagaacgagttaatt
gtgggcaaaaaagaagatttagccacgcattcgcttaaggctaaaaacaaatctttaacg
aaagattttaaaaatggcgaatattctatcaaggcccgttacaggagcgtgcctactaaa
gcgtttgtgagcttgagagatgaggcgattgaagtggagtttgaagagcctttttatggc
gtggctaaagggcaagccttagtcgtttataaagatgacatcttgcttggcgggggcgtg
attgtttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (11)   
   Pfam (11)   
All databases (30)   

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