KEGG   Helicobacter pylori Shi470: HPSH_07280
Entry
HPSH_07280        CDS       T00742                                 
Name
(GenBank) polysialic acid capsule expression protein (kpsF)
  KO
K06041  arabinose-5-phosphate isomerase [EC:5.3.1.13]
Organism
hps  Helicobacter pylori Shi470
Pathway
hps00540  Lipopolysaccharide biosynthesis
hps01100  Metabolic pathways
hps01250  Biosynthesis of nucleotide sugars
Module
hps_M00063  CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:hps00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00540 Lipopolysaccharide biosynthesis
    HPSH_07280
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01005 Lipopolysaccharide biosynthesis proteins [BR:hps01005]
    HPSH_07280
Enzymes [BR:hps01000]
 5. Isomerases
  5.3  Intramolecular oxidoreductases
   5.3.1  Interconverting aldoses and ketoses, and related compounds
    5.3.1.13  arabinose-5-phosphate isomerase
     HPSH_07280
Lipopolysaccharide biosynthesis proteins [BR:hps01005]
 Lipid A
  HPSH_07280
SSDB
Motif
Pfam: SIS CBS SIS_2
Other DBs
NCBI-ProteinID: ACD48849
Position
complement(1419009..1419998)
AA seq 329 aa
MSMPLDYNAIAAQVLRDEASALLESVKQFQKPNDLEAIVKLILKSQEKGGKLVIVGVGKS
ALVAQKIVASMLSTGNKSAFLHPTEAMHGDLGMVEKNDVVLMISYGGESLELLNLVSHLK
RLSHKIITFTKSPTSSLSKLGDYYLSLKIQKEACPINTAPTTSTTLTLALGDVLMACLMR
AKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTNLPLIAPSTSFKDALIEMSEKRLGSAI
LVNEANELVGILSDGDVRRALLKGLNLKSEVKRFATLKPKSFKNLDALLLEALEFLERHK
IQLLVCVDDRNKVLGVLHLHQLLELGLKA
NT seq 990 nt   +upstreamnt  +downstreamnt
atgtccatgccacttgattacaacgctatcgccgcgcaagtcttaagagatgaagcgagc
gcgcttttagaaagcgttaagcaattccaaaaacctaacgatttagaagcgattgtcaag
ctcattttaaaaagccaagaaaaagggggtaagcttgtgatagtgggcgtgggtaagagc
gctttagtggcgcaaaaaatcgttgcttctatgctaagcaccggtaacaaaagcgcgttt
ttacaccccacagaagccatgcatggggatttgggcatggtggaaaaaaacgatgtggtt
ttaatgattagctatgggggcgagtctttagaattattgaatctggtgagccatttaaaa
cgcttgagccataaaatcatcactttcactaaaagccccaccagctcgctctctaaactc
ggcgattattatttgagcttgaaaattcaaaaagaagcttgcccgattaacaccgctcca
acgacttccaccaccctaactctagcgttaggcgatgttttaatggcatgtttgatgcga
gcgaaaaactttagccaagaagattttgcctcctttcatccgggcgggcttttaggcaaa
aaactttttgtcaaggttaaagacttgctgcaaaccacgaatctccccttaatcgctcct
agcacaagctttaaagacgcgctcatagaaatgagtgaaaaacgcttaggcagcgcgatt
ttagtcaatgaggctaacgagcttgtggggattttgagcgatggcgatgtccgtagggcg
ttattgaaagggcttaacttaaagagcgaagtgaagcgttttgccactttaaaacctaaa
agctttaagaatttagacgctcttcttttagaagcgttggaatttttagagcgccataag
atccagcttttagtgtgcgtggatgatcgcaataaggttttaggggtcttgcacttgcac
caacttttagaattagggcttaaagcatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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