KEGG   Hydrogenophaga pseudoflava: HPF_03945
Entry
HPF_03945         CDS       T06073                                 
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
hpse  Hydrogenophaga pseudoflava
Pathway
hpse00300  Lysine biosynthesis
hpse00470  D-Amino acid metabolism
hpse01100  Metabolic pathways
hpse01110  Biosynthesis of secondary metabolites
hpse01120  Microbial metabolism in diverse environments
hpse01230  Biosynthesis of amino acids
Module
hpse_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:hpse00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    HPF_03945 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    HPF_03945 (dapF)
Enzymes [BR:hpse01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     HPF_03945 (dapF)
SSDB
Motif
Pfam: DAP_epimerase CART
Other DBs
NCBI-ProteinID: QBM26821
UniProt: A0A4P6WZH3
Position
791965..792840
AA seq 291 aa
MRVHFTKMQGAGNDFVVLDETRGRLGLSAAQYRFLADRHFGVGADQILSVRPAPSDGVDF
EYVIHNADGGEVEHCGNGARCFVRYVRDKGLTDLNPVRVKVKHGEISLALNDDGRVTVDM
GAPIFDLARVPFDSAGQTPTPMGNFERWSLPLAAGDVAPVAVLSMGNPHAVLLVDNVDTA
PVPTWGPQIERHAQFPARVNAGFLQVLDRAHVRLRVYERGVGETLACGTGACAAVVAGIR
LGLLDDSVDVETRGGRLTIAWGDNAAHDAPVFMTGPATSVFEGEIDVPELA
NT seq 876 nt   +upstreamnt  +downstreamnt
atgcgagtgcacttcaccaaaatgcagggcgcgggcaacgacttcgtcgtgctcgacgag
acccgtggccgcctcggtctgagcgcggcccagtaccgtttcctggccgaccgccacttc
ggcgtcggcgccgaccagatcctgtcggtgcgccccgcgccgtcggacggcgtggacttc
gaatacgtgatccacaacgccgacggcggtgaggttgaacactgtggcaacggtgcgcgc
tgctttgtgcgctacgtgcgcgacaaggggctcacggatctgaacccggtgcgcgtgaag
gtgaaacacggcgagatcagcctggccctgaacgacgatggccgcgtcaccgtggacatg
ggcgcgcccatcttcgacctggcgcgcgtgcctttcgactcggcgggccagacgcccaca
ccgatgggcaacttcgagcgctggtccctgccgctggccgctggcgatgtggcgccggtg
gccgtgctctccatgggcaacccgcacgccgtgctgctggtggacaacgtggacacggcg
cccgtgcccacctggggaccgcagatcgagcgccatgcgcaattccctgcgcgcgtgaac
gcgggtttcctgcaggtgctggaccgcgcccatgtgcgcctgcgcgtgtacgaacgcggc
gtgggcgagaccctggcctgcggcactggcgcctgcgcggcggtggtggccggcatccgc
ctgggcctgctggacgacagcgtcgacgtcgagacgcgcggcggccggctcaccatcgca
tggggcgacaatgcggcccatgacgcaccggtcttcatgaccggaccggccacctcggtg
ttcgagggcgagatcgacgtccccgagctggcctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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