KEGG   Helicobacter pylori Sat464: HPSAT_00550
Entry
HPSAT_00550       CDS       T01897                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
hpt  Helicobacter pylori Sat464
Brite
KEGG Orthology (KO) [BR:hpt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hpt03032]
    HPSAT_00550
   03400 DNA repair and recombination proteins [BR:hpt03400]
    HPSAT_00550
Enzymes [BR:hpt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     HPSAT_00550
DNA replication proteins [BR:hpt03032]
 Prokaryotic type
  DNA Topoisomerases
   HPSAT_00550
DNA repair and recombination proteins [BR:hpt03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      HPSAT_00550
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim DUF1272 Lar_restr_allev Zn-ribbon_8 LysW-like_globular zf_Rg
Other DBs
NCBI-ProteinID: ADO04864
Position
109258..111468
AA seq 736 aa
MKHLIIVESPAKAKTIKNFLDKNYEVIASKGHVRDLSKFALGIKIDETGFTPNYVVDKDH
KELVKQIIELSKKASTTYIATDEDREGEAIGYHVACLIGGKLESYPRIVFHEITQNAILN
ALKTPRKIDMSKVNAQQARRFLDRIVGFKLSSLIASKITKGLSAGRVQSAALKLVIDKER
EIKAFKPLTYFTLDAYFEPHLEAQLISYKGNKLKAQELIDGKKAQEIKNELEKESYTISS
IIKKSKKSPTPPPFMTSTLQQSASSLLGFSPTKTMSIAQKLYEGVATPQGVMGVITYMRT
DSLNIAKEALEEARNKILKDYGKDYLPPKAKVYSSKNKNAQEAHEAIRPTSIVLEPNALK
DYLKPEELKLYTLIYKRFLASQMQDALFESQSMVVACEKGEFKASGRKLLFDGYYKILGN
DDKDKLLPNLKENDPIKLEKLESNAHVTEPPARYSEASLIKVLESLGIGRPSTYAPTISL
LQNRDYIKVEKKQISALESAFKVIEILEKHFEEIVDSKFSASLEEELDNIAQNKADYQQV
LKDFYYPFMDKIEAGKKNIISQKVHEKTGQSCPKCGGELVKKNSRYGEFVACNNYPKCKY
IKQTENANDGAKQESCEKCGGEMVQKFSRNGAFLACNNYPECKNTKSLKNTPNANEIIEG
VKCPECGGDIALKRSKKGSFYGCNNYPKCNFLSNHKPINKRCEKCHYLMSERTYRKKKAH
ECIQCKERVFLEEDDG
NT seq 2211 nt   +upstreamnt  +downstreamnt
atgaagcaccttattattgtagaatcccccgcaaaagccaaaaccattaaaaattttttg
gataaaaattacgaagtcatcgcctctaaagggcatgttagggatttgtccaaattcgct
ttaggcattaagattgatgaaacaggcttcactcctaattatgtcgtggataaagatcat
aaagagcttgtcaaacagatcatagagctttccaaaaaggcatctaccacctacatcgct
accgatgaagacagggaaggggaagcgataggctatcatgtggcatgcttgattgggggg
aaattagagagctatcctaggatcgtttttcatgagatcacgcaaaatgcgattttaaac
gctctaaaaaccccacgaaaaattgacatgtcaaaagtcaatgcccaacaagccaggcgc
tttttggatcggatcgtgggttttaagctcagttcgttgattgcatcaaaaatcactaaa
ggtttgagcgctgggcgggtgcaaagcgcggctttaaagcttgtgattgataaagagagg
gagattaaagcctttaagcctttaacctacttcacgctagacgcttattttgagccgcat
ttagaagcgcaactcattagctataagggcaacaaactcaaagcccaagagcttattgat
ggaaaaaaagctcaagagattaaaaacgaattagaaaaagaaagctacactatttccagt
attattaaaaaatctaaaaaatcccccacaccgccccctttcatgacttctactttacag
caaagcgcttccagtcttttaggcttttcgcccacaaaaaccatgagtatcgctcaaaaa
ttgtatgagggcgtagccaccccgcaaggggttatgggggtgatcacttacatgaggacc
gatagcttgaatatcgctaaagaagctttagaagaagcgaggaataagattttaaaagac
tatggcaaagactacttaccccctaaagccaaagtctattccagcaagaataaaaacgcc
caagaagcccatgaagcgatcaggcccacttctattgttttagagccaaacgctttaaaa
gactaccttaagcctgaagaattaaagctctataccttaatttacaaacgcttcttagct
tctcaaatgcaagacgctctttttgaaagccaaagcatggttgtggcttgcgaaaaaggc
gagtttaaagccagtggcagaaaactcctttttgatggctattataaaattttaggcaat
gacgataaggacaaattgctccccaatttgaaagaaaacgaccccattaaattagaaaaa
ctagagagcaacgcccatgttacagaacctccagcgcgctattcagaagcgagtttgatt
aaagttttagaaagtttaggcataggcaggcccagcacctacgccccaacgatttccctc
ttacaaaacagagactacatcaaggtagaaaaaaagcaaatcagcgctttagagagcgct
tttaaggtgatagaaattttagaaaagcattttgaagaaatcgtggattccaaattcagc
gcttctttagaagaggagctggacaatatcgctcaaaataaagccgactatcagcaagtc
ttaaaggacttttactacccctttatggataaaattgaagctgggaaaaagaatatcatc
tctcaaaaagtgcatgaaaaaaccggccaatcatgccctaaatgcggaggggaattggtc
aaaaaaaatagccgttatggggaatttgtcgcttgcaacaattaccctaaatgcaaatat
atcaaacaaactgaaaacgccaatgatggagccaagcaagaatcgtgcgaaaaatgcgga
ggggaaatggtgcaaaaattcagcagaaacggggcgtttttagcttgcaacaactaccct
gaatgcaaaaacaccaaatcgttaaaaaacacccctaacgcaaacgaaataatagaaggc
gtgaaatgcccagaatgcgggggggatattgccttaaaaaggagtaagaaaggctcgttt
tatggttgcaacaattaccctaaatgcaattttttatccaaccataagcctatcaacaag
cgttgtgaaaaatgccattatttgatgagtgaaagaacctatcgcaaaaaaaaggcgcat
gaatgcatccaatgcaaagagcgcgtgtttttagaggaagatgatggctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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