KEGG   Helicobacter pylori Sat464: HPSAT_02900
Entry
HPSAT_02900       CDS       T01897                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
hpt  Helicobacter pylori Sat464
Pathway
hpt03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:hpt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    HPSAT_02900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hpt03021]
    HPSAT_02900
   03400 DNA repair and recombination proteins [BR:hpt03400]
    HPSAT_02900
Enzymes [BR:hpt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     HPSAT_02900
Transcription machinery [BR:hpt03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     HPSAT_02900
DNA repair and recombination proteins [BR:hpt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      HPSAT_02900
SSDB
Motif
Pfam: RNA_pol_Rpb6 DUF2533
Other DBs
NCBI-ProteinID: ADO05325
Position
571127..571351
AA seq 74 aa
MKKERTESLVAQALKNIGNDRYMLDNLVFARVKQLNAGAKTLVNMDPKRHKLVDIAIREI
AEGKIDIDRIDERN
NT seq 225 nt   +upstreamnt  +downstreamnt
ttgaaaaaagagagaacagagagtttagtcgctcaagccttaaaaaatattgggaacgac
cgctacatgctagataatttagttttcgctcgtgtgaagcaattaaacgccggagccaag
actttagtgaatatggaccccaaacgccataaattagtggatattgccattagagaaatc
gctgaagggaaaattgatatagacaggatagatgaacgaaattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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