KEGG   Helicobacter pylori Sat464: HPSAT_03305
Entry
HPSAT_03305       CDS       T01897                                 
Name
(GenBank) DNA gyrase subunit A
  KO
K02469  DNA gyrase subunit A [EC:5.6.2.2]
Organism
hpt  Helicobacter pylori Sat464
Brite
KEGG Orthology (KO) [BR:hpt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hpt03032]
    HPSAT_03305
   03400 DNA repair and recombination proteins [BR:hpt03400]
    HPSAT_03305
Enzymes [BR:hpt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     HPSAT_03305
DNA replication proteins [BR:hpt03032]
 Prokaryotic type
  DNA Topoisomerases
   HPSAT_03305
DNA repair and recombination proteins [BR:hpt03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      HPSAT_03305
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C Retrotran_gag_2
Other DBs
NCBI-ProteinID: ADO05399
Position
complement(642920..645400)
AA seq 826 aa
MQDNLINETKNIVEVGIDSSIEESYLAYSMSVIIGRALPDARDGLKPVHRRILYAMHELG
LTSKVAYKKSARIVGDVIGKYHPHGDNAVYDALVRMAQDFSMRLELVDGQGNFGSIDGDN
AAAMRYTEARMTKASEEILRDIDKDTIDFVPNYDDTLKEPDILPSRLPNLLVNGANGIAV
GMATSIPPHRIDEIIDALVHVLENPNAGLDEILEFVKGPDFPTGGIIYGKAGIIEAYKTG
RGRVKVRAKVHVEKTKNKEIIVLDEMPFQTNKAKLVEQISDLAREKQIEGISEVRDESDR
EGIRVVIELKRDAMSEIVLNHLYKLTTMETTFSIILLAIYNKEPKIFTLLELLRLFLNHR
KTIIIRRTIFELEKAKARAHILEGYLIALDNIDEIVRLIKTSQSPEAAKNALMERFTLSE
IQSKAILEMRLQRLTGLERDKIKEEYQNLLELIGDLNGILKSEDRLNEVVKTELLEVKEQ
FSSPRRTEIQEVYENIDIEDLIANEPMVVSMSYKGYVKRVDLKAYERQNRGGKGKLSGNT
YEDDFIENFFVANTHDILLFITNKGQLYRLKVYKIPEASRIAMGKAIVNLISLAPDEKIM
ATLSTKDFSDERSLAFFTKNGVVKRTNLSEFDSNYNGMRAIVLDEGDELVSAKIVDKNAK
HLLIASYLGLFIKFPLEDVREIGRTTRGVRGIRLNENDFVVGAVVISDDSNKLLSVSENG
LGKQTLAEAYREQSRGGKGIIGMKLTQKTGNLVSVISVDDENLDLMILTASAKMIRVSIK
DIKETIGRNTSGVKLIDTADKVVYANSCPKEEEPENSENPPTQLFE
NT seq 2481 nt   +upstreamnt  +downstreamnt
atgcaagataatttaatcaatgaaacaaaaaatattgtagaagtggggattgattcttct
attgaagagagctatttagcttattcaatgagcgtgatcatagggcgcgctttaccggac
gctagagatggcttaaagcccgtgcataggcgtattttgtatgcgatgcatgaattaggc
ctcacttccaaagtcgcttataaaaaaagcgctaggatcgtgggtgatgtgattggtaaa
taccacccccatggcgataacgcggtttatgatgcgctagtgagaatggcgcaagatttt
tctatgcgtttggaattggtggatgggcaaggcaactttggctctattgatggcgataat
gctgcggcgatgcgttacactgaagccagaatgaccaaggcgagtgaagaaattttaagg
gatattgataaagacaccattgattttgtgcctaattacgatgacaccttaaaagagccc
gatattttaccaagccgtctgcctaaccttttagtcaatggggctaatgggatcgctgta
gggatggcgacttctatcccccctcacaggattgatgaaatcatagacgctttagtgcat
gtcttagaaaaccctaacgctggattagatgaaattttggaatttgtcaaagggcctgac
tttcccactggcgggatcatttatggcaaggcgggtattattgaagcctataaaacgggg
cgagggcgcgtgaaagtgcgcgccaaagtgcatgtggaaaagacgaaaaataaagaaatt
atcgttttagatgaaatgccttttcaaaccaataaagccaaattagtggaacaaatcagc
gatttagcgcgagaaaaacaaattgaaggcattagcgaagtgcgcgatgagagcgacaga
gagggcattagagtggtgattgaattaaaaagagatgcgatgagtgaaattgtcttaaac
cacctctacaaactcaccaccatggagaccacttttagcatcattttactcgctatttac
aataaagagcctaagattttcacgcttttagagttgttgcgcctttttttaaaccacaga
aaaaccattattataagacgcactatttttgaattagagaaggctaaagctagagcgcat
attttagagggctatttgatcgcattagacaatattgatgaaatcgtgcgactcattaaa
acaagccaaagcccagaagcggctaaaaacgccttaatggagcgttttactttgagcgaa
atccagagcaaagctattttagaaatgcgtttgcaacgcttaacaggccttgaaagagat
aaaattaaagaagaataccaaaacttgctagagcttattggtgatctcaatggcatttta
aagagcgaagatcgcttgaatgaagtcgtcaaaacagagcttttagaagtcaaagagcaa
ttttcttctccaaggcgcactgaaattcaagaagtttatgaaaatattgacatagaagat
ttgatcgctaatgagcctatggtggtgagcatgagctataaaggctatgtgaaaagagtg
gatttgaaagcttatgaaaggcaaaatcgtggcggtaagggcaagctttcaggcaacact
tatgaagacgatttcattgaaaacttttttgtggctaacacgcatgatattttgctcttt
atcaccaacaaggggcagttgtatcgtttgaaagtctataagatcccagaagcgagccgg
atcgctatgggtaaagccatcgtgaatttaatctcgctcgctcctgatgaaaagatcatg
gcaaccctaagcaccaaagactttagcgatgaacgctctttagctttcttcaccaaaaat
ggcgtggtgaaacgcaccaatttgagcgaatttgacagcaactataacggtatgagagcg
attgttttagatgaaggcgatgaattggtgagtgcaaaaattgtggataaaaacgctaaa
catttgctcatcgcatcgtatttgggccttttcattaaattccctttagaagatgtgcgc
gagatcggaagaactactcgtggggttagaggaatcaggctgaatgaaaatgattttgtt
gtcggcgcggtcgttattagcgatgacagcaacaagcttttgagcgtgagtgaaaacggg
cttggcaagcaaactttagccgaagcgtatagagagcaatctcgtggaggtaaggggatc
attggcatgaagctcactcaaaagaccggcaatctagtgagcgttatcagcgtggatgat
gaaaacctggatttgatgatccttactgcaagcgcgaaaatgatcagagtttctattaaa
gatattaaagaaaccatcggaagaaatactagtggggtaaaactcatagacaccgctgat
aaagtcgtgtatgccaattcttgccctaaagaagaagagccagaaaattcagaaaaccct
cccacacaattgtttgaatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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