KEGG   Helicobacter pylori v225d: HPV225_0003
Entry
HPV225_0003       CDS       T01899                                 
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
  KO
K01627  2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
Organism
hpv  Helicobacter pylori v225d
Pathway
hpv00540  Lipopolysaccharide biosynthesis
hpv01100  Metabolic pathways
hpv01250  Biosynthesis of nucleotide sugars
Module
hpv_M00063  CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:hpv00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00540 Lipopolysaccharide biosynthesis
    HPV225_0003 (kdsA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01005 Lipopolysaccharide biosynthesis proteins [BR:hpv01005]
    HPV225_0003 (kdsA)
Enzymes [BR:hpv01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.55  3-deoxy-8-phosphooctulonate synthase
     HPV225_0003 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:hpv01005]
 Lipid A
  HPV225_0003 (kdsA)
SSDB
Motif
Pfam: DAHP_synth_1 DUF3657
Other DBs
NCBI-ProteinID: ADI34113
Position
complement(899..1729)
AA seq 276 aa
MKTSKTKTPKPVLIAGPCVIESLENLRSIATKLQPLANNERLDFYFKASFDKANRTSLES
YRGPGLEKGLEMLQTIKDEFGYKILTDVHESYQASAAAKVADILQIPAFLCRQTDLIVEV
SQTNAIINIKKGQFMNPKDMQYSVLKALKTRDSSIQSPTYETALKNGVWLCERGSSFGYG
NLVVDMRSLKIMREFAPVIFDATHSVQMPGGANGKSSGDSSFAPILARAAAAVGIDGLFA
ETHVDPKNALSDGANMLKPDELEHLVADMLKIQNLF
NT seq 831 nt   +upstreamnt  +downstreamnt
atgaaaacttctaaaacaaaaacccctaaacccgttttaatcgctggcccatgcgtcatt
gagagcttagaaaatctaagaagtatcgctactaaattacaacccctagccaacaacgag
cggttggatttttattttaaagcgagttttgataaggcgaaccgcacgagtttagagagt
tacagagggcctggtttagaaaaaggcttagaaatgttacaaaccatcaaagatgaattt
ggctataaaattttaaccgatgtgcatgagagctatcaagcaagcgcagcggccaaagta
gcggatattttacaaatcccggcgtttttgtgccgccaaacggatctgattgtagaagtg
agccaaactaacgctattatcaatatcaaaaaagggcaattcatgaacccaaaagacatg
caatattccgttctaaaagcccttaaaacgagagatagtagcattcaaagccccacttat
gaaacagcgttaaaaaatggcgtgtggttgtgtgaaagggggagcagctttgggtatggg
aatttagtggtggatatgcgttctttaaaaatcatgcgagagtttgcccctgtgattttt
gacgctactcatagcgtgcaaatgccagggggagcgaacgggaaaagttcaggcgatagc
tcttttgcccctattttagccagagcggcggcggcggttgggattgatgggttgttcgct
gagacgcatgttgatcctaaaaacgccctaagcgacggagcgaacatgctaaaacctgac
gagctagaacatttagtagccgacatgttaaaaatccaaaatttattttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

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