KEGG   Helicobacter pylori 2018: hp2018_0717
Entry
hp2018_0717       CDS       T01914                                 
Symbol
rimO
Name
(GenBank) Ribosomal protein S12p methylthiotransferase/Ribosome maturation factor
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
hpw  Helicobacter pylori 2018
Brite
KEGG Orthology (KO) [BR:hpw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hpw03009]
    hp2018_0717 (rimO)
Enzymes [BR:hpw01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     hp2018_0717 (rimO)
Ribosome biogenesis [BR:hpw03009]
 Prokaryotic type
  ribosomal protein modification factors
   hp2018_0717 (rimO)
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM_2 Rotavirus_VP3 CLP1_P Ca_bind_SSO6904 DUF2981 Oxidored_nitro
Other DBs
NCBI-ProteinID: ADZ51417
Position
complement(732039..733358)
AA seq 439 aa
MQVKENKQLCLISLGCSKNLVDSEVMLGKLYNYTLTNDAKKADVILINTCGFIESAKQES
IQTILNAAKDKKEGAILIASGCLSERYKDEIKELIPEVDIFTGVGDYDKIDILIAKKQNQ
FSEQVFLSEHYNARIITGSSVHAYVKISEGCNQKCSFCAIPSFKGKLQSRELDSILKEVE
DLALKGYKDMTFIAQDSSSFLYDKGQKDGLIQLIKAIDKQQALKSARILYLYPSSTTLEL
IGAIEDSPIFQNYFDMPIQHISDSMLKKMRRNSSQAHHLKLLDAMKQVKESFIRSTIIVG
HPEENEGEFEELSAFLDEFRFDRLNIFAFSAEENTHAYSLEKVPKKIINARIKALNKIAL
KHQNHSFKALLNKPIKALVERKEGEYFYKARDLRWAPEVDGEILINDSALTTPLQPGHYT
IVPSAFKDNILLAKVLSPF
NT seq 1320 nt   +upstreamnt  +downstreamnt
atgcaagttaaagaaaacaaacaactctgcttgatctcattaggttgctctaaaaacttg
gtggattcagaagtgatgttaggcaagctttataactacacgctcaccaatgacgctaaa
aaagccgatgtgattttgatcaacacttgcgggtttattgaaagcgctaaacaagagagt
atccaaaccattctcaacgccgccaaagacaaaaaagagggagcgattttaattgcgagc
gggtgcttgagcgagcgctataaagatgaaatcaaagagctgatccctgaagtggatatt
tttaccggcgtgggggattatgacaagattgatattttaatcgctaaaaaacaaaaccag
ttcagcgagcaagtgtttttaagcgagcattataacgcgcgcatcatcaccggatcgagc
gtgcatgcttacgttaaaatttctgagggctgtaaccaaaaatgctctttttgcgctatc
cctagctttaaggggaaattgcaaagcagggaattagattccattttaaaagaagtagaa
gatctagcccttaagggctataaggatatgacttttatcgctcaagactctagctcattt
ttatacgataaggggcaaaaagacggcttgatccagctcattaaggcaattgacaaacaa
caagccttaaagagcgctcgtatcttatacctctacccctctagcaccactttagagctg
attggcgcgattgaagactcgcctatttttcaaaattattttgacatgcccatccagcat
atcagcgactccatgcttaaaaaaatgcgccgtaactctagccaagcgcaccatttaaag
cttttagatgccatgaagcaggttaaagaaagctttataagaagcacgatcattgtaggg
catccagaagaaaatgagggcgaatttgaagaattgagcgcgtttttagatgagtttcgg
tttgatcgattgaatatttttgctttcagcgcggaagaaaacacgcatgcctattcttta
gagaaagtgcctaaaaaaatcatcaacgcccgcattaaagccttgaataaaatcgcttta
aaacaccaaaaccattcttttaaggctttgttgaataagcccattaaggcgttagtggaa
cgtaaagagggcgagtatttttacaaagctagggatctcaggtgggcgcctgaagtggat
ggggaaattttaatcaacgacagcgccttaaccacccctttacaacccggtcattacacg
attgtgcctagcgcctttaaagacaatatcttactcgctaaggttttaagccctttttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (26)   

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