KEGG   Helicobacter pylori 2018: hp2018_0911
Entry
hp2018_0911       CDS       T01914                                 
Name
(GenBank) tRNA pseudouridine 13 synthase
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
hpw  Helicobacter pylori 2018
Brite
KEGG Orthology (KO) [BR:hpw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hpw03016]
    hp2018_0911
Enzymes [BR:hpw01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     hp2018_0911
Transfer RNA biogenesis [BR:hpw03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    hp2018_0911
 Prokaryotic type
    hp2018_0911
SSDB
Motif
Pfam: TruD GutM
Other DBs
NCBI-ProteinID: ADZ51615
Position
929487..930632
AA seq 381 aa
MNLNFMPLLHAYNHASIDFHFNSSTRDFCVHEVPLYEFSNTGEHAVIQVRKSGLSTLEML
QIFSQILGVKIAELGYAGLKDKNALTTQFISLPKKYAPLLEKNTSNFQERNLKILSLNYH
HNKIKLGHLKGNRFFMRFKKMTPLNAQKTEQVLEQIAQFGMPNYFGSQRFGKFNDNHKEG
LKILQNETKFAHQKLNAFLISSYQSYLFNSLLSKRLEISKIISTFSVKENLEFFKQKNLS
VNSNALKALKNQAHPFKILEGDVMRHYPYGKFFDALKLEKESERFLNKEAVPTGLLDGKK
ALYAKNLSLEIEKGFQHNLLSSHARTLGSRRFFWVFAENITSQYIKEKAQFELGFYLPKG
SYASALLKEIKHEKGENNDEF
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgaatttaaattttatgcccctattgcatgcttataaccatgcgagcattgattttcat
ttcaattctagcactagggatttttgcgtgcatgaagtgcctttgtatgaatttagcaac
acgggcgaacatgccgttattcaagtgaggaaaagcggtttaagcactttagaaatgctt
caaattttttctcaaattttaggggtaaaaatcgccgaattgggttatgcgggcttgaaa
gataaaaacgcgctgacgactcaattcatctcactccctaaaaaatacgcccctttatta
gaaaaaaatacgagcaactttcaagaaagaaaccttaaaatcctgtctttgaattaccat
cacaataaaatcaaattagggcatttgaaagggaatcgcttttttatgcgttttaaaaaa
atgacccccctaaacgctcaaaaaacggagcaagttttagaacaaatcgcgcagtttggc
atgcctaattattttggttcgcaacgctttgggaagttcaatgacaaccataaagagggt
ttaaaaatcttacaaaatgaaacgaaattcgctcatcaaaaattaaacgcttttttaatt
tcaagctatcaaagttatttgtttaactcgcttttaagcaaacgattagaaatcagtaaa
atcattagcacttttagcgtcaaagaaaatttagaattttttaaacaaaaaaatttaagc
gttaattcaaacgccctaaaagcccttaaaaaccaagcccacccctttaaaatcttagaa
ggcgatgtgatgcgccattacccttatgggaagttttttgacgctttgaaattagaaaaa
gagagcgaaaggtttttgaacaaagaagctgtgcctacggggttactagacggcaaaaaa
gctctttatgcaaaaaatttgagtttagaaattgaaaaaggattccagcataacctttta
agtagccatgctagaacgctaggatccaggcggtttttttgggtgtttgcagaaaatata
acttctcaatacatcaaagaaaaagcgcaatttgaattgggattttacttgcctaaaggg
agttatgcgagcgcgttgctcaaagaaatcaagcatgagaaaggagaaaataatgacgaa
ttttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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