KEGG   Helicobacter pylori Aklavik117: HPAKL117_03475
Entry
HPAKL117_03475    CDS       T02352                                 
Name
(GenBank) hypothetical protein
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
hpya  Helicobacter pylori Aklavik117
Brite
KEGG Orthology (KO) [BR:hpya00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hpya03009]
    HPAKL117_03475
Enzymes [BR:hpya01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     HPAKL117_03475
Ribosome biogenesis [BR:hpya03009]
 Prokaryotic type
  ribosomal protein modification factors
   HPAKL117_03475
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM_2 Rotavirus_VP3 CLP1_P DUF2981 Oxidored_nitro
Other DBs
NCBI-ProteinID: AFX91101
UniProt: K7YBP0
Position
complement(728573..729892)
AA seq 439 aa
MQIKENKQLCLISLGCSKNLVDSEVMLGKLYNYTLTNDTKSADVILINTCGFIESAKQES
IQTILNAAKDKKKGAILIASGCLSERYKDEIKELIPEVDIFTGVGDYDKIDIMIAKKQNQ
FSEQVFLSEHYNARIITGSSVHAYVKISEGCNQKCSFCAIPSFKGKLQSRELDSILKEVE
NLALKGYRDMTFIAQDSSSFLYDKGQKDGLIQLISAIDKQQALKSARILYLYPSSTTLEL
IGAIESSPIFQNYFDMPIQHISDSMLKKMRRNSSQAHHLKLLDAMKQVKESFIRSTIIVG
HPEENEGEFEELSAFLDEFRFDRLNIFAFSAEENTHAYSLEKVPKKIINARIKVLNKIAL
KHQNNSFKALLNKPIKALVENKEGEYFYKARDLRWAPEVDGEILINDSELSTPLKPGHYT
IMPSAFKDNILLAKVLSPF
NT seq 1320 nt   +upstreamnt  +downstreamnt
atgcaaattaaagaaaacaaacaactctgcttaatttcattaggttgctctaaaaatttg
gtggattcagaagtgatgttaggcaagctttataattacacgctcactaatgacactaag
agcgctgatgtgattttgattaacacttgcggttttattgaaagcgccaaacaagagagt
atccaaaccattctaaacgctgctaaagacaaaaaaaagggagcgattttgattgcgagc
gggtgcttgagcgagcgctataaagatgaaatcaaagaattgatccctgaagtggatatt
tttaccggcgtgggggattatgacaagattgatataatgattgctaaaaaacaaaaccag
ttcagcgagcaagtgtttttaagcgagcattataacgcgcgcatcatcacgggatcgagc
gtgcatgcgtatgttaaaatttctgagggttgcaatcaaaaatgctctttttgcgctatc
cctagctttaaggggaaattacaaagcagagaattagactccattttaaaagaagtggaa
aatctcgcgcttaaaggctatagggatatgacttttatcgctcaagattctagctccttt
ttatacgataaggggcaaaaagacggcttgatccagctcattagtgcgattgacaaacag
caagccttaaagagcgctcgcatcttatacctctacccttctagcaccacgctagagctt
attggcgcgattgaaagttcgcccatttttcaaaattattttgacatgcccatccagcat
atcagcgattccatgcttaaaaaaatgcggcgcaactccagccaagcgcaccatttaaag
cttttagatgccatgaagcaggttaaagaaagctttatcagaagcacgatcattgtaggg
catccggaagaaaatgagggcgaatttgaggaattgagtgcgtttttggacgagttccgg
tttgaccggttgaatatttttgctttcagcgctgaagaaaacacgcatgcctattcttta
gagaaagtgcctaaaaaaatcatcaacgctcgcattaaagtcttgaataaaatcgctcta
aagcaccagaacaattcctttaaggctttgttgaataagcccattaaggcgttagtggaa
aataaagagggcgagtatttttacaaagcaagggatttgagatgggcgcctgaagtggat
ggggaaatcttaatcaacgacagcgaattatccacccctttaaaacccgggcattatacg
attatgcctagcgcatttaaagacaatatcttactcgctaaggttttaagccctttttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (26)   

Download RDF
DBGET integrated database retrieval system