KEGG   Helicobacter pylori oki112: HPOKI112_06100
Entry
HPOKI112_06100    CDS       T03723                                 
Name
(GenBank) signal recognition particle
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
hpyc  Helicobacter pylori oki112
Pathway
hpyc02024  Quorum sensing
hpyc03060  Protein export
hpyc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hpyc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    HPOKI112_06100
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HPOKI112_06100
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HPOKI112_06100
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hpyc02044]
    HPOKI112_06100
Enzymes [BR:hpyc01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     HPOKI112_06100
Secretion system [BR:hpyc02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   HPOKI112_06100
  Eukaryotic Sec-SRP protein
   HPOKI112_06100
SSDB
Motif
Pfam: SRP54 SRP_SPB CbiA SRP54_N AAA_31 AAA_22 Zeta_toxin AAA_30 AAA_24 nSTAND3 cobW AAA_17 APS_kinase 6PF2K AAA_19 ArsA_ATPase AAA_16 AAA_14 SLFN-g3_helicase Fer4_NifH AAA AAA_11 ABC_tran NTPase_1 AAA_33 T2SSE Thymidylate_kin ParA DO-GTPase1 NACHT KTI12 ResIII AAA_5 MraZ TsaE ParBc AAA_18 ATP_bind_1 YqeC PhageMin_Tail
Other DBs
NCBI-ProteinID: AHN36585
UniProt: X2HVU5
Position
complement(1235066..1236412)
AA seq 448 aa
MFQTLSDGFKNALNKIRFQDDEKALDRALDELKKTLLKNDVHHKVARELLKKVESQTKLN
GIGKQQFLDALEKSLLEILSAKGSSGFTFAQTPPTVVLMAGLQGSGKTTTTAKLAHYLKT
KNKKVLLCACDLQRLAAVEQLKVLGEQVGVEVFYEENKSVKEIANNALKRAKEAQFDVLL
VDSAGRLAIDKELMQELKEVKEVLNPHEVLYVADALSGQDGVKSANTFNEEIGVSGVVLS
KFDSDSKGGIALGITYQLGLPLRFIGSGEKIPDLDVFVPERIVGRLMGAGDIISLAEKTA
SVLNPNEAKDLSKKLKKGQFTFNDFLNQIEKVKKLGSMSSLISMIPGLGNMANALKDTDL
ESSLEVKKIKAMVNSMTKKEQENPEILNGSRRKRIALGSGLEVSEINRIIKRFDQASKMA
KRLTNKKGISDLMNLMSQAKNQTPPKMR
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgtttcaaacattaagcgatgggtttaaaaacgcgctcaataaaatccgctttcaagat
gatgaaaaagcgctagacagagcgttagatgaattgaaaaaaacgcttttaaaaaatgat
gtgcatcataaagtggctagagaattgctcaaaaaagtggaaagtcaaaccaaacttaat
ggcattggtaagcagcaatttttagacgctttagaaaagagtttgttagaaattttaagc
gctaaagggagcagtggttttactttcgctcaaacgccccccaccgtggttttaatggca
ggtttgcaagggagcggtaagacaaccaccaccgctaaactcgctcattatttaaaaacc
aaaaataaaaaagtgcttttatgcgcatgcgatttgcaacgcttagcagcggtggagcaa
ttaaaggttttaggcgaacaggtgggtgtggaagttttttatgaagaaaataaaagcgtg
aaagaaatcgctaacaacgctttaaaaagggctaaagaagcgcaatttgatgttttgctc
gtggatagtgcggggcgtttagccattgataaagagcttatgcaagaattaaaagaagtt
aaagaagtcttaaacccccatgaggtgctgtatgtcgcagacgcattgagcgggcaagat
ggggtcaaaagcgcaaacacctttaatgaagaaataggcgtgagtggggtggtgttaagc
aaatttgacagcgattctaaagggggtatcgccttaggcatcacttaccaattaggctta
cccttgcgttttattgggagcggggaaaaaatccctgatctagatgtgtttgtgcctgaa
aggattgtggggcgtttgatgggggctggagatattatctcgctcgctgaaaaaaccgcc
agcgttttaaaccctaatgaagccaaagatttaagcaaaaaactcaaaaaagggcaattc
actttcaatgactttttaaaccagattgaaaaagtgaaaaaattaggctctatgagttct
ctaatttctatgattccaggtttagggaatatggcaaacgcgctaaaagacacggattta
gaaagctctttagaggtgaaaaaaatcaaggctatggtcaattccatgactaaaaaagag
caagaaaacccagagattttaaacggcagccgaagaaaaaggatcgctttagggagcggc
ttagaagtgtctgaaatcaaccgcatcatcaaacgctttgatcaagcgagcaaaatggca
aaacgcttaacgaataaaaagggcattagcgatttgatgaatctaatgagtcaggctaaa
aatcaaacaccccctaaaatgcgctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (40)   
   Pfam (40)   
All databases (52)   

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