KEGG   Helicobacter pylori oki112: HPOKI112_06540
Entry
HPOKI112_06540    CDS       T03723                                 
Name
(GenBank) DNA polymerase III subunit delta'
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
hpyc  Helicobacter pylori oki112
Pathway
hpyc03030  DNA replication
hpyc03430  Mismatch repair
hpyc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hpyc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HPOKI112_06540
   03430 Mismatch repair
    HPOKI112_06540
   03440 Homologous recombination
    HPOKI112_06540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hpyc03032]
    HPOKI112_06540
   03400 DNA repair and recombination proteins [BR:hpyc03400]
    HPOKI112_06540
Enzymes [BR:hpyc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HPOKI112_06540
DNA replication proteins [BR:hpyc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HPOKI112_06540
DNA repair and recombination proteins [BR:hpyc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HPOKI112_06540
SSDB
Motif
Pfam: DNA_pol3_delta2 EMP24_GP25L Msg2_C
Other DBs
NCBI-ProteinID: AHN36660
UniProt: X2HW24
Position
1326169..1326825
AA seq 218 aa
MKNSNRLIYTDNLEESLEEAASLFEHHIKFYTEIIEKDKKVIKTFNKDFKIEHAKEVLSK
ANLKHSELNAFLIAAPSYGVEAQNALLKILEEPPNNVCFIMFAKSPNHVLATIKSRLIKE
DKRQKIPIKPLDLDLSRLDLKDIYAFLKNLDKENFDSRENQREKIESLLESIHRHQIYLS
EQELQAFDLAIKANSSYYKLSYNLLPLLLSLLSKKKTP
NT seq 657 nt   +upstreamnt  +downstreamnt
gtgaaaaactccaaccgtctcatttatacggacaatcttgaagagagcctagaagaggct
gcaagcctttttgaacaccacattaaattctacaccgagattattgaaaaagacaaaaag
gtgatcaaaacttttaacaaggattttaaaatagagcatgccaaagaagtcctatccaaa
gccaatctcaaacacagcgaattaaacgcctttttaatcgccgcgcccagctatggcgta
gaagcccaaaacgcgcttttaaaaatcttagaagaaccccctaataatgtttgttttatc
atgttcgctaaaagcccaaaccatgttttagccaccattaaatcccgcctgatcaaagaa
gacaaacgccaaaaaatccccataaaacctttagatttggatttatcaaggctggatttg
aaagatatttacgcatttttaaaaaatttagacaaagaaaattttgattctagagaaaat
cagagggaaaaaattgaaagcctgttagagagtattcacagacaccaaatctatttgagc
gagcaagaattgcaagcctttgatttagcgatcaaggctaacagctcttattacaagctc
agctataatcttttacccctgcttttaagccttttatccaaaaagaaaacgccatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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